Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.39□□□□□ -0.43
Smad1P70340 Gm13570-201ENSMUST00000140763 309 ntBASIC12.39□□□□□ -0.43
Smad1P70340 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.39□□□□□ -0.43
Smad1P70340 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smad1P70340 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.39□□□□□ -0.43
Smad1P70340 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.39□□□□□ -0.43
Smad1P70340 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smad1P70340 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.39□□□□□ -0.43
Smad1P70340 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.39□□□□□ -0.43
Smad1P70340 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smad1P70340 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smad1P70340 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smad1P70340 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smad1P70340 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smad1P70340 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smad1P70340 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smad1P70340 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smad1P70340 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smad1P70340 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smad1P70340 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smad1P70340 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Smad1P70340 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smad1P70340 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Smad1P70340 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smad1P70340 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.39□□□□□ -0.43
Smad1P70340 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.39□□□□□ -0.43
Smad1P70340 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smad1P70340 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Smad1P70340 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Smad1P70340 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smad1P70340 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smad1P70340 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smad1P70340 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smad1P70340 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smad1P70340 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smad1P70340 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smad1P70340 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smad1P70340 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smad1P70340 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smad1P70340 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smad1P70340 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smad1P70340 Gm23270-201ENSMUST00000104055 131 ntBASIC12.38□□□□□ -0.43
Smad1P70340 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smad1P70340 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smad1P70340 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smad1P70340 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Smad1P70340 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smad1P70340 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Smad1P70340 Gm5523-201ENSMUST00000180415 997 ntBASIC12.38□□□□□ -0.43
Smad1P70340 Mir6927-201ENSMUST00000184494 71 ntBASIC12.38□□□□□ -0.43
Smad1P70340 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.38□□□□□ -0.43
Smad1P70340 AA914427-201ENSMUST00000193194 1166 ntBASIC12.38□□□□□ -0.43
Smad1P70340 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smad1P70340 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smad1P70340 Gm45925-201ENSMUST00000218882 744 ntBASIC12.38□□□□□ -0.43
Smad1P70340 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smad1P70340 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smad1P70340 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Smad1P70340 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Smad1P70340 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smad1P70340 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smad1P70340 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smad1P70340 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smad1P70340 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smad1P70340 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Smad1P70340 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smad1P70340 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smad1P70340 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smad1P70340 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smad1P70340 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smad1P70340 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smad1P70340 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smad1P70340 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smad1P70340 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smad1P70340 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smad1P70340 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smad1P70340 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smad1P70340 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.37□□□□□ -0.43
Smad1P70340 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.37□□□□□ -0.43
Smad1P70340 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smad1P70340 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smad1P70340 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smad1P70340 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Smad1P70340 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.37□□□□□ -0.43
Smad1P70340 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smad1P70340 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smad1P70340 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Smad1P70340 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smad1P70340 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smad1P70340 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smad1P70340 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smad1P70340 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smad1P70340 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smad1P70340 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smad1P70340 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smad1P70340 Gm11930-201ENSMUST00000117788 190 ntBASIC12.37□□□□□ -0.43
Smad1P70340 Gm13736-201ENSMUST00000119272 253 ntBASIC12.37□□□□□ -0.43
Smad1P70340 Gm13665-201ENSMUST00000120830 528 ntBASIC12.37□□□□□ -0.43
Smad1P70340 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smad1P70340 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms