Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm7593-201ENSMUST00000187246 644 ntBASIC12.29□□□□□ -0.44
Ybx1P62960 Gm44882-201ENSMUST00000205702 802 ntBASIC12.29□□□□□ -0.44
Ybx1P62960 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ybx1P62960 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ybx1P62960 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ybx1P62960 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ybx1P62960 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ybx1P62960 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.29□□□□□ -0.44
Ybx1P62960 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ybx1P62960 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ybx1P62960 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ybx1P62960 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ybx1P62960 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ybx1P62960 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ybx1P62960 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ybx1P62960 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ybx1P62960 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.29□□□□□ -0.44
Ybx1P62960 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ybx1P62960 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ybx1P62960 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ybx1P62960 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ybx1P62960 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ybx1P62960 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ybx1P62960 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ybx1P62960 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ybx1P62960 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Ybx1P62960 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ybx1P62960 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ybx1P62960 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ybx1P62960 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.28□□□□□ -0.44
Ybx1P62960 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ybx1P62960 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ybx1P62960 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.28□□□□□ -0.44
Ybx1P62960 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ybx1P62960 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Ybx1P62960 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ybx1P62960 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.28□□□□□ -0.44
Ybx1P62960 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ybx1P62960 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ybx1P62960 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ybx1P62960 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ybx1P62960 Gm16166-201ENSMUST00000118291 787 ntBASIC12.28□□□□□ -0.44
Ybx1P62960 Gm15352-201ENSMUST00000118696 270 ntBASIC12.28□□□□□ -0.44
Ybx1P62960 Gm16071-201ENSMUST00000119589 793 ntBASIC12.28□□□□□ -0.44
Ybx1P62960 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.28□□□□□ -0.44
Ybx1P62960 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC12.28□□□□□ -0.44
Ybx1P62960 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ybx1P62960 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.28□□□□□ -0.44
Ybx1P62960 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ybx1P62960 Gm17826-201ENSMUST00000189720 798 ntBASIC12.28□□□□□ -0.44
Ybx1P62960 Gm44329-201ENSMUST00000197469 112 ntBASIC12.28□□□□□ -0.44
Ybx1P62960 Gm43520-201ENSMUST00000197996 164 ntBASIC12.28□□□□□ -0.44
Ybx1P62960 Gm43186-201ENSMUST00000198130 824 ntBASIC12.28□□□□□ -0.44
Ybx1P62960 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.28□□□□□ -0.44
Ybx1P62960 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC12.28□□□□□ -0.44
Ybx1P62960 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC12.28□□□□□ -0.44
Ybx1P62960 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ybx1P62960 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ybx1P62960 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ybx1P62960 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.28□□□□□ -0.44
Ybx1P62960 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ybx1P62960 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ybx1P62960 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ybx1P62960 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ybx1P62960 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ybx1P62960 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ybx1P62960 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ybx1P62960 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ybx1P62960 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ybx1P62960 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ybx1P62960 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ybx1P62960 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.28□□□□□ -0.44
Ybx1P62960 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ybx1P62960 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ybx1P62960 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ybx1P62960 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ybx1P62960 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ybx1P62960 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ybx1P62960 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ybx1P62960 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Ybx1P62960 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Ybx1P62960 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Ybx1P62960 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.27□□□□□ -0.44
Ybx1P62960 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ybx1P62960 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ybx1P62960 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ybx1P62960 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ybx1P62960 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ybx1P62960 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ybx1P62960 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ybx1P62960 Gm13916-201ENSMUST00000117368 628 ntBASIC12.27□□□□□ -0.45
Ybx1P62960 Gm12795-201ENSMUST00000117594 539 ntBASIC12.27□□□□□ -0.45
Ybx1P62960 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ybx1P62960 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Ybx1P62960 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.27□□□□□ -0.45
Ybx1P62960 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ybx1P62960 Gm22138-201ENSMUST00000158748 128 ntBASIC12.27□□□□□ -0.45
Ybx1P62960 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ybx1P62960 Gm9358-201ENSMUST00000183067 927 ntBASIC12.27□□□□□ -0.45
Ybx1P62960 Gm44980-201ENSMUST00000205826 314 ntBASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms