Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.78□□□□□ -0.36
NrlP54846 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NrlP54846 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NrlP54846 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
NrlP54846 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.78□□□□□ -0.36
NrlP54846 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
NrlP54846 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
NrlP54846 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
NrlP54846 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
NrlP54846 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.36
NrlP54846 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
NrlP54846 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
NrlP54846 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
NrlP54846 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
NrlP54846 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
NrlP54846 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
NrlP54846 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
NrlP54846 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NrlP54846 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
NrlP54846 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NrlP54846 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.77□□□□□ -0.37
NrlP54846 Gm22144-201ENSMUST00000157402 102 ntBASIC12.77□□□□□ -0.37
NrlP54846 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.77□□□□□ -0.37
NrlP54846 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
NrlP54846 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NrlP54846 Gm9797-202ENSMUST00000218003 294 ntBASIC12.77□□□□□ -0.37
NrlP54846 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.77□□□□□ -0.37
NrlP54846 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NrlP54846 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NrlP54846 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.77□□□□□ -0.37
NrlP54846 Gm5705-201ENSMUST00000066241 711 ntBASIC12.77□□□□□ -0.37
NrlP54846 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NrlP54846 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NrlP54846 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
NrlP54846 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NrlP54846 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NrlP54846 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC12.77□□□□□ -0.37
NrlP54846 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NrlP54846 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
NrlP54846 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.77□□□□□ -0.37
NrlP54846 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NrlP54846 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
NrlP54846 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NrlP54846 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NrlP54846 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NrlP54846 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.77□□□□□ -0.37
NrlP54846 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NrlP54846 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
NrlP54846 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NrlP54846 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
NrlP54846 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
NrlP54846 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.76□□□□□ -0.37
NrlP54846 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NrlP54846 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NrlP54846 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.76□□□□□ -0.37
NrlP54846 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
NrlP54846 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NrlP54846 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
NrlP54846 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
NrlP54846 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
NrlP54846 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
NrlP54846 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC12.76□□□□□ -0.37
NrlP54846 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.76□□□□□ -0.37
NrlP54846 Gm4726-201ENSMUST00000135604 736 ntBASIC12.76□□□□□ -0.37
NrlP54846 Gm6019-201ENSMUST00000148369 736 ntBASIC12.76□□□□□ -0.37
NrlP54846 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.76□□□□□ -0.37
NrlP54846 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
NrlP54846 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
NrlP54846 Gm9358-201ENSMUST00000183067 927 ntBASIC12.76□□□□□ -0.37
NrlP54846 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NrlP54846 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.76□□□□□ -0.37
NrlP54846 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NrlP54846 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NrlP54846 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
NrlP54846 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.76□□□□□ -0.37
NrlP54846 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
NrlP54846 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
NrlP54846 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NrlP54846 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
NrlP54846 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.76□□□□□ -0.37
NrlP54846 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
NrlP54846 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.76□□□□□ -0.37
NrlP54846 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
NrlP54846 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.76□□□□□ -0.37
NrlP54846 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NrlP54846 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NrlP54846 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.76□□□□□ -0.37
NrlP54846 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NrlP54846 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
NrlP54846 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NrlP54846 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.75□□□□□ -0.37
NrlP54846 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
NrlP54846 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
NrlP54846 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
NrlP54846 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NrlP54846 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
NrlP54846 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
NrlP54846 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
NrlP54846 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NrlP54846 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms