Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox1P53783 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox1P53783 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sox1P53783 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox1P53783 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox1P53783 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Sox1P53783 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox1P53783 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Sox1P53783 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox1P53783 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox1P53783 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox1P53783 Gm13171-201ENSMUST00000117233 391 ntBASIC12.26□□□□□ -0.45
Sox1P53783 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox1P53783 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sox1P53783 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox1P53783 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox1P53783 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Sox1P53783 Gm24809-201ENSMUST00000175318 271 ntBASIC12.26□□□□□ -0.45
Sox1P53783 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.26□□□□□ -0.45
Sox1P53783 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC12.26□□□□□ -0.45
Sox1P53783 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Sox1P53783 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Sox1P53783 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC12.26□□□□□ -0.45
Sox1P53783 Gm37851-201ENSMUST00000193871 889 ntBASIC12.26□□□□□ -0.45
Sox1P53783 Gm43671-201ENSMUST00000200422 433 ntBASIC12.26□□□□□ -0.45
Sox1P53783 Gm2448-201ENSMUST00000207080 559 ntBASIC12.26□□□□□ -0.45
Sox1P53783 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox1P53783 Rps3a2-201ENSMUST00000074245 792 ntBASIC12.26□□□□□ -0.45
Sox1P53783 Rps3a3-201ENSMUST00000074680 795 ntBASIC12.26□□□□□ -0.45
Sox1P53783 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox1P53783 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox1P53783 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox1P53783 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox1P53783 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.26□□□□□ -0.45
Sox1P53783 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Sox1P53783 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox1P53783 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox1P53783 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Sox1P53783 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox1P53783 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Sox1P53783 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox1P53783 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sox1P53783 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox1P53783 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox1P53783 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox1P53783 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sox1P53783 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Sox1P53783 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox1P53783 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox1P53783 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sox1P53783 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox1P53783 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox1P53783 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sox1P53783 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sox1P53783 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Sox1P53783 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox1P53783 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sox1P53783 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.25□□□□□ -0.45
Sox1P53783 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox1P53783 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox1P53783 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox1P53783 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Sox1P53783 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.25□□□□□ -0.45
Sox1P53783 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sox1P53783 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Sox1P53783 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Sox1P53783 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Sox1P53783 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC12.25□□□□□ -0.45
Sox1P53783 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sox1P53783 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Sox1P53783 Gm24328-201ENSMUST00000175104 67 ntBASIC12.25□□□□□ -0.45
Sox1P53783 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox1P53783 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Sox1P53783 Gm34379-201ENSMUST00000195036 290 ntBASIC12.25□□□□□ -0.45
Sox1P53783 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Sox1P53783 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC12.25□□□□□ -0.45
Sox1P53783 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox1P53783 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Sox1P53783 Gm6641-201ENSMUST00000196100 1315 ntBASIC12.25□□□□□ -0.45
Sox1P53783 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.25□□□□□ -0.45
Sox1P53783 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox1P53783 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox1P53783 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sox1P53783 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.25□□□□□ -0.45
Sox1P53783 AC174797.1-201ENSMUST00000224339 1649 ntBASIC12.25□□□□□ -0.45
Sox1P53783 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Sox1P53783 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Sox1P53783 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.25□□□□□ -0.45
Sox1P53783 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox1P53783 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.25□□□□□ -0.45
Sox1P53783 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox1P53783 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox1P53783 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox1P53783 Grk6-205ENSMUST00000224653 2976 ntBASIC12.24□□□□□ -0.45
Sox1P53783 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sox1P53783 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox1P53783 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox1P53783 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Sox1P53783 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Sox1P53783 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 105.1 ms