Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rfx2P48379 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Rfx2P48379 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx2P48379 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx2P48379 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx2P48379 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx2P48379 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx2P48379 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx2P48379 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx2P48379 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx2P48379 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx2P48379 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx2P48379 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx2P48379 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx2P48379 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx2P48379 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx2P48379 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Rfx2P48379 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Rfx2P48379 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx2P48379 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx2P48379 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx2P48379 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Rfx2P48379 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Rfx2P48379 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Rfx2P48379 Gm15711-201ENSMUST00000118889 535 ntBASIC12.59□□□□□ -0.39
Rfx2P48379 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.59□□□□□ -0.39
Rfx2P48379 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx2P48379 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Rfx2P48379 Mir3547-201ENSMUST00000175461 88 ntBASIC12.59□□□□□ -0.39
Rfx2P48379 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx2P48379 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.59□□□□□ -0.39
Rfx2P48379 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx2P48379 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.59□□□□□ -0.39
Rfx2P48379 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.59□□□□□ -0.39
Rfx2P48379 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.59□□□□□ -0.39
Rfx2P48379 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx2P48379 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx2P48379 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx2P48379 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Rfx2P48379 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Rfx2P48379 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx2P48379 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx2P48379 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx2P48379 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Rfx2P48379 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx2P48379 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx2P48379 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Rfx2P48379 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.59□□□□□ -0.39
Rfx2P48379 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.59□□□□□ -0.39
Rfx2P48379 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx2P48379 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx2P48379 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx2P48379 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.59□□□□□ -0.39
Rfx2P48379 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx2P48379 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rfx2P48379 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx2P48379 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx2P48379 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx2P48379 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx2P48379 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
Rfx2P48379 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.58□□□□□ -0.4
Rfx2P48379 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx2P48379 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx2P48379 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.58□□□□□ -0.4
Rfx2P48379 Gm14263-201ENSMUST00000117955 746 ntBASIC12.58□□□□□ -0.4
Rfx2P48379 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx2P48379 Gm43962-201ENSMUST00000203898 190 ntBASIC12.58□□□□□ -0.4
Rfx2P48379 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.58□□□□□ -0.4
Rfx2P48379 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx2P48379 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx2P48379 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Rfx2P48379 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx2P48379 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx2P48379 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx2P48379 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.58□□□□□ -0.4
Rfx2P48379 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx2P48379 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx2P48379 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx2P48379 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx2P48379 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.58□□□□□ -0.4
Rfx2P48379 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx2P48379 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx2P48379 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx2P48379 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx2P48379 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Rfx2P48379 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx2P48379 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx2P48379 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx2P48379 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx2P48379 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx2P48379 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx2P48379 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Rfx2P48379 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.57□□□□□ -0.4
Rfx2P48379 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx2P48379 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.57□□□□□ -0.4
Rfx2P48379 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx2P48379 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx2P48379 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx2P48379 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rfx2P48379 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms