Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Sox18P43680 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sox18P43680 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC11.72□□□□□ -0.53
Sox18P43680 Gm27427-201ENSMUST00000185134 193 ntBASIC11.72□□□□□ -0.53
Sox18P43680 Gm42779-201ENSMUST00000198807 406 ntBASIC11.72□□□□□ -0.53
Sox18P43680 Gm43952-201ENSMUST00000203765 751 ntBASIC11.72□□□□□ -0.53
Sox18P43680 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC11.72□□□□□ -0.53
Sox18P43680 Gm45074-201ENSMUST00000209091 1240 ntBASIC11.72□□□□□ -0.53
Sox18P43680 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC11.72□□□□□ -0.53
Sox18P43680 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Sox18P43680 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sox18P43680 Gm10288-201ENSMUST00000084614 537 ntBASIC11.72□□□□□ -0.53
Sox18P43680 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox18P43680 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox18P43680 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox18P43680 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox18P43680 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sox18P43680 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox18P43680 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox18P43680 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox18P43680 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Sox18P43680 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sox18P43680 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.71□□□□□ -0.53
Sox18P43680 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox18P43680 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox18P43680 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox18P43680 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox18P43680 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sox18P43680 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sox18P43680 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Sox18P43680 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sox18P43680 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox18P43680 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox18P43680 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox18P43680 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sox18P43680 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Sox18P43680 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Sox18P43680 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox18P43680 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox18P43680 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Sox18P43680 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Sox18P43680 Gm14219-201ENSMUST00000120414 288 ntBASIC11.71□□□□□ -0.53
Sox18P43680 Gm15937-201ENSMUST00000120727 1235 ntBASIC11.71□□□□□ -0.53
Sox18P43680 Gm8089-201ENSMUST00000122463 968 ntBASIC11.71□□□□□ -0.53
Sox18P43680 A230072E10Rik-201ENSMUST00000146161 676 ntTSL 5 BASIC11.71□□□□□ -0.53
Sox18P43680 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox18P43680 Gm17063-201ENSMUST00000168135 456 ntBASIC11.71□□□□□ -0.53
Sox18P43680 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.71□□□□□ -0.53
Sox18P43680 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.71□□□□□ -0.53
Sox18P43680 Gm3650-201ENSMUST00000180600 747 ntBASIC11.71□□□□□ -0.53
Sox18P43680 Mir6923-201ENSMUST00000184592 72 ntBASIC11.71□□□□□ -0.53
Sox18P43680 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC11.71□□□□□ -0.53
Sox18P43680 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sox18P43680 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox18P43680 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC11.71□□□□□ -0.53
Sox18P43680 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC11.71□□□□□ -0.53
Sox18P43680 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC11.71□□□□□ -0.53
Sox18P43680 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sox18P43680 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC11.71□□□□□ -0.53
Sox18P43680 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC11.71□□□□□ -0.53
Sox18P43680 Gm5149-202ENSMUST00000199980 1250 ntTSL 2 BASIC11.71□□□□□ -0.53
Sox18P43680 Gm44760-201ENSMUST00000206375 1173 ntBASIC11.71□□□□□ -0.53
Sox18P43680 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.71□□□□□ -0.53
Sox18P43680 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Sox18P43680 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox18P43680 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Sox18P43680 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox18P43680 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox18P43680 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox18P43680 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox18P43680 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sox18P43680 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.71□□□□□ -0.54
Sox18P43680 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.71□□□□□ -0.54
Sox18P43680 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sox18P43680 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sox18P43680 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sox18P43680 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sox18P43680 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Sox18P43680 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sox18P43680 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Sox18P43680 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sox18P43680 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Sox18P43680 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.71□□□□□ -0.54
Sox18P43680 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Sox18P43680 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Sox18P43680 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sox18P43680 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.54
Sox18P43680 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Sox18P43680 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sox18P43680 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox18P43680 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox18P43680 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox18P43680 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox18P43680 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox18P43680 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox18P43680 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Sox18P43680 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox18P43680 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox18P43680 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox18P43680 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms