Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox5P35710 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox5P35710 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox5P35710 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Sox5P35710 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sox5P35710 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox5P35710 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Sox5P35710 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox5P35710 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox5P35710 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox5P35710 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sox5P35710 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Sox5P35710 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Sox5P35710 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sox5P35710 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox5P35710 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox5P35710 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Sox5P35710 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox5P35710 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC13.06□□□□□ -0.32
Sox5P35710 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox5P35710 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Sox5P35710 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC13.06□□□□□ -0.32
Sox5P35710 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Sox5P35710 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox5P35710 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox5P35710 Gm6023-201ENSMUST00000118217 606 ntBASIC13.06□□□□□ -0.32
Sox5P35710 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC13.06□□□□□ -0.32
Sox5P35710 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sox5P35710 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sox5P35710 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.06□□□□□ -0.32
Sox5P35710 Gm45784-201ENSMUST00000188360 142 ntBASIC13.06□□□□□ -0.32
Sox5P35710 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sox5P35710 Gm38241-201ENSMUST00000192641 898 ntBASIC13.06□□□□□ -0.32
Sox5P35710 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.06□□□□□ -0.32
Sox5P35710 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.06□□□□□ -0.32
Sox5P35710 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox5P35710 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox5P35710 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox5P35710 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Sox5P35710 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC13.06□□□□□ -0.32
Sox5P35710 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sox5P35710 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC13.06□□□□□ -0.32
Sox5P35710 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Sox5P35710 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox5P35710 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox5P35710 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC13.06□□□□□ -0.32
Sox5P35710 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox5P35710 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox5P35710 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox5P35710 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sox5P35710 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Sox5P35710 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.05□□□□□ -0.32
Sox5P35710 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Sox5P35710 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox5P35710 Gm43242-201ENSMUST00000199507 1776 ntBASIC13.05□□□□□ -0.32
Sox5P35710 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox5P35710 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC13.05□□□□□ -0.32
Sox5P35710 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox5P35710 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Sox5P35710 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sox5P35710 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox5P35710 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Sox5P35710 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.05□□□□□ -0.32
Sox5P35710 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox5P35710 Gm10434-201ENSMUST00000101158 471 ntBASIC13.05□□□□□ -0.32
Sox5P35710 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.05□□□□□ -0.32
Sox5P35710 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sox5P35710 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.05□□□□□ -0.32
Sox5P35710 Gm5419-201ENSMUST00000119301 527 ntBASIC13.05□□□□□ -0.32
Sox5P35710 Gm4986-201ENSMUST00000119731 549 ntBASIC13.05□□□□□ -0.32
Sox5P35710 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox5P35710 Gm27514-201ENSMUST00000183692 110 ntBASIC13.05□□□□□ -0.32
Sox5P35710 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.05□□□□□ -0.32
Sox5P35710 Gm36987-201ENSMUST00000194704 2979 ntBASIC13.05□□□□□ -0.32
Sox5P35710 Gm37008-201ENSMUST00000195712 319 ntBASIC13.05□□□□□ -0.32
Sox5P35710 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.05□□□□□ -0.32
Sox5P35710 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.05□□□□□ -0.32
Sox5P35710 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.05□□□□□ -0.32
Sox5P35710 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.05□□□□□ -0.32
Sox5P35710 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox5P35710 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox5P35710 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Sox5P35710 Gm8420-201ENSMUST00000097103 598 ntBASIC13.05□□□□□ -0.32
Sox5P35710 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox5P35710 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sox5P35710 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox5P35710 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sox5P35710 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sox5P35710 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox5P35710 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox5P35710 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Sox5P35710 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Sox5P35710 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sox5P35710 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sox5P35710 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.05□□□□□ -0.32
Sox5P35710 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox5P35710 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox5P35710 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sox5P35710 Gm45496-201ENSMUST00000209918 2917 ntBASIC13.04□□□□□ -0.32
Sox5P35710 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms