Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC9.47□□□□□ -0.89
Rom1P32958 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC9.47□□□□□ -0.89
Rom1P32958 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC9.47□□□□□ -0.89
Rom1P32958 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Rom1P32958 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC9.47□□□□□ -0.89
Rom1P32958 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC9.47□□□□□ -0.89
Rom1P32958 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC9.47□□□□□ -0.89
Rom1P32958 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC9.47□□□□□ -0.89
Rom1P32958 Gm44711-201ENSMUST00000205414 1264 ntBASIC9.47□□□□□ -0.89
Rom1P32958 AC132104.2-201ENSMUST00000215011 266 ntBASIC9.47□□□□□ -0.89
Rom1P32958 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC9.47□□□□□ -0.89
Rom1P32958 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rom1P32958 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Rom1P32958 Gm10076-201ENSMUST00000073238 384 ntBASIC9.47□□□□□ -0.89
Rom1P32958 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rom1P32958 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC9.47□□□□□ -0.89
Rom1P32958 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rom1P32958 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rom1P32958 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rom1P32958 Gm6189-201ENSMUST00000164487 2082 ntBASIC9.47□□□□□ -0.89
Rom1P32958 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC9.47□□□□□ -0.89
Rom1P32958 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rom1P32958 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rom1P32958 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rom1P32958 Gm38292-201ENSMUST00000192646 3045 ntBASIC9.47□□□□□ -0.89
Rom1P32958 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rom1P32958 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rom1P32958 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Rom1P32958 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rom1P32958 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rom1P32958 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Rom1P32958 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rom1P32958 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Rom1P32958 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC9.46□□□□□ -0.89
Rom1P32958 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Rom1P32958 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Rom1P32958 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Rom1P32958 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Rom1P32958 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Rom1P32958 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Rom1P32958 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
Rom1P32958 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.9
Rom1P32958 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rom1P32958 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC9.46□□□□□ -0.9
Rom1P32958 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.9
Rom1P32958 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Rom1P32958 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rom1P32958 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC9.46□□□□□ -0.9
Rom1P32958 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Rom1P32958 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC9.46□□□□□ -0.9
Rom1P32958 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Rom1P32958 Gm5904-201ENSMUST00000210286 865 ntBASIC9.46□□□□□ -0.9
Rom1P32958 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.9
Rom1P32958 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC9.46□□□□□ -0.9
Rom1P32958 AC139382.1-201ENSMUST00000221402 498 ntBASIC9.46□□□□□ -0.9
Rom1P32958 Wdyhv1-203ENSMUST00000226889 394 ntBASIC9.46□□□□□ -0.9
Rom1P32958 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rom1P32958 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rom1P32958 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rom1P32958 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rom1P32958 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rom1P32958 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rom1P32958 Gm10146-201ENSMUST00000072739 309 ntBASIC9.46□□□□□ -0.9
Rom1P32958 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rom1P32958 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC9.46□□□□□ -0.9
Rom1P32958 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Rom1P32958 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rom1P32958 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Rom1P32958 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rom1P32958 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rom1P32958 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Rom1P32958 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC9.46□□□□□ -0.9
Rom1P32958 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC9.46□□□□□ -0.9
Rom1P32958 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rom1P32958 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Rom1P32958 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rom1P32958 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.9
Rom1P32958 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC9.46□□□□□ -0.9
Rom1P32958 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.9
Rom1P32958 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rom1P32958 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Rom1P32958 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC9.46□□□□□ -0.9
Rom1P32958 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rom1P32958 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rom1P32958 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rom1P32958 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rom1P32958 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rom1P32958 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rom1P32958 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rom1P32958 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC9.45□□□□□ -0.9
Rom1P32958 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Rom1P32958 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rom1P32958 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rom1P32958 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rom1P32958 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rom1P32958 Gm36940-201ENSMUST00000194281 2036 ntBASIC9.45□□□□□ -0.9
Rom1P32958 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Rom1P32958 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rom1P32958 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rom1P32958 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms