Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pde6bP23440 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.15□□□□□ -0.3
Pde6bP23440 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pde6bP23440 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pde6bP23440 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pde6bP23440 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pde6bP23440 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.15□□□□□ -0.3
Pde6bP23440 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Pde6bP23440 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pde6bP23440 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pde6bP23440 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pde6bP23440 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC13.15□□□□□ -0.3
Pde6bP23440 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pde6bP23440 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pde6bP23440 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Pde6bP23440 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pde6bP23440 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.15□□□□□ -0.3
Pde6bP23440 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pde6bP23440 Gm24891-201ENSMUST00000104391 136 ntBASIC13.15□□□□□ -0.3
Pde6bP23440 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC13.15□□□□□ -0.3
Pde6bP23440 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC13.15□□□□□ -0.3
Pde6bP23440 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC13.15□□□□□ -0.3
Pde6bP23440 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pde6bP23440 Gm14760-201ENSMUST00000121831 999 ntBASIC13.15□□□□□ -0.3
Pde6bP23440 Gm10051-201ENSMUST00000145209 414 ntBASIC13.15□□□□□ -0.3
Pde6bP23440 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC13.15□□□□□ -0.3
Pde6bP23440 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pde6bP23440 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC13.15□□□□□ -0.3
Pde6bP23440 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pde6bP23440 Gm5051-201ENSMUST00000204085 485 ntBASIC13.15□□□□□ -0.3
Pde6bP23440 Gm6905-201ENSMUST00000205729 511 ntBASIC13.15□□□□□ -0.3
Pde6bP23440 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pde6bP23440 AC153954.1-201ENSMUST00000216959 255 ntBASIC13.15□□□□□ -0.3
Pde6bP23440 CT009738.1-201ENSMUST00000219031 809 ntBASIC13.15□□□□□ -0.3
Pde6bP23440 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Pde6bP23440 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pde6bP23440 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.15□□□□□ -0.3
Pde6bP23440 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pde6bP23440 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC13.15□□□□□ -0.3
Pde6bP23440 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Pde6bP23440 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pde6bP23440 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.15□□□□□ -0.3
Pde6bP23440 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pde6bP23440 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pde6bP23440 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pde6bP23440 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.15□□□□□ -0.31
Pde6bP23440 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.15□□□□□ -0.31
Pde6bP23440 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pde6bP23440 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6bP23440 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Pde6bP23440 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6bP23440 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6bP23440 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pde6bP23440 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.14□□□□□ -0.31
Pde6bP23440 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6bP23440 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6bP23440 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6bP23440 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6bP23440 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6bP23440 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6bP23440 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6bP23440 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6bP23440 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.14□□□□□ -0.31
Pde6bP23440 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC13.14□□□□□ -0.31
Pde6bP23440 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6bP23440 Gm7851-201ENSMUST00000117574 323 ntBASIC13.14□□□□□ -0.31
Pde6bP23440 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC13.14□□□□□ -0.31
Pde6bP23440 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC13.14□□□□□ -0.31
Pde6bP23440 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC13.14□□□□□ -0.31
Pde6bP23440 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pde6bP23440 Gm23085-201ENSMUST00000157849 293 ntBASIC13.14□□□□□ -0.31
Pde6bP23440 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6bP23440 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6bP23440 Mir7032-201ENSMUST00000185154 79 ntBASIC13.14□□□□□ -0.31
Pde6bP23440 Gm28196-201ENSMUST00000187719 640 ntBASIC13.14□□□□□ -0.31
Pde6bP23440 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC13.14□□□□□ -0.31
Pde6bP23440 Gm3332-201ENSMUST00000189337 928 ntBASIC13.14□□□□□ -0.31
Pde6bP23440 Gm37246-201ENSMUST00000192665 835 ntBASIC13.14□□□□□ -0.31
Pde6bP23440 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC13.14□□□□□ -0.31
Pde6bP23440 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Pde6bP23440 Gm4157-201ENSMUST00000211647 679 ntBASIC13.14□□□□□ -0.31
Pde6bP23440 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6bP23440 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6bP23440 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6bP23440 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6bP23440 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6bP23440 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6bP23440 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6bP23440 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6bP23440 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6bP23440 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6bP23440 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6bP23440 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6bP23440 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.14□□□□□ -0.31
Pde6bP23440 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6bP23440 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6bP23440 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6bP23440 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6bP23440 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6bP23440 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms