Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
NclP09405 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NclP09405 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
NclP09405 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
NclP09405 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NclP09405 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NclP09405 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NclP09405 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NclP09405 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NclP09405 Gm20554-201ENSMUST00000177421 2352 ntBASIC17.78■□□□□ 0.44
NclP09405 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC17.78■□□□□ 0.44
NclP09405 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC17.78■□□□□ 0.44
NclP09405 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC17.78■□□□□ 0.44
NclP09405 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC17.78■□□□□ 0.44
NclP09405 Gm37835-201ENSMUST00000193305 361 ntBASIC17.78■□□□□ 0.44
NclP09405 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NclP09405 AC125486.1-201ENSMUST00000218701 320 ntBASIC17.78■□□□□ 0.44
NclP09405 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NclP09405 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NclP09405 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NclP09405 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NclP09405 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NclP09405 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NclP09405 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NclP09405 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NclP09405 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
NclP09405 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NclP09405 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC17.77■□□□□ 0.44
NclP09405 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NclP09405 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
NclP09405 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NclP09405 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
NclP09405 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NclP09405 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NclP09405 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NclP09405 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NclP09405 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NclP09405 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
NclP09405 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NclP09405 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
NclP09405 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NclP09405 Gm7467-201ENSMUST00000185173 652 ntBASIC17.77■□□□□ 0.44
NclP09405 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC17.77■□□□□ 0.44
NclP09405 Gm45575-201ENSMUST00000210283 548 ntBASIC17.77■□□□□ 0.44
NclP09405 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NclP09405 AC122408.1-201ENSMUST00000218949 218 ntBASIC17.77■□□□□ 0.44
NclP09405 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NclP09405 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NclP09405 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NclP09405 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NclP09405 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NclP09405 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NclP09405 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
NclP09405 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NclP09405 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC17.77■□□□□ 0.43
NclP09405 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
NclP09405 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NclP09405 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
NclP09405 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NclP09405 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NclP09405 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
NclP09405 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NclP09405 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NclP09405 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NclP09405 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
NclP09405 Gm6189-201ENSMUST00000164487 2082 ntBASIC17.76■□□□□ 0.43
NclP09405 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NclP09405 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NclP09405 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NclP09405 CT009757.3-201ENSMUST00000223367 2320 ntBASIC17.76■□□□□ 0.43
NclP09405 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
NclP09405 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NclP09405 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NclP09405 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NclP09405 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NclP09405 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
NclP09405 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
NclP09405 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NclP09405 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
NclP09405 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
NclP09405 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NclP09405 Gm15131-201ENSMUST00000119124 595 ntBASIC17.76■□□□□ 0.43
NclP09405 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NclP09405 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NclP09405 Gm19287-201ENSMUST00000203190 358 ntBASIC17.76■□□□□ 0.43
NclP09405 Gm2553-201ENSMUST00000215986 605 ntBASIC17.76■□□□□ 0.43
NclP09405 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NclP09405 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
NclP09405 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NclP09405 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NclP09405 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NclP09405 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
NclP09405 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
NclP09405 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
NclP09405 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NclP09405 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
NclP09405 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NclP09405 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NclP09405 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NclP09405 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms