Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxb3P09026 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Hoxb3P09026 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxb3P09026 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxb3P09026 Gm24934-201ENSMUST00000103764 111 ntBASIC12.13□□□□□ -0.47
Hoxb3P09026 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.13□□□□□ -0.47
Hoxb3P09026 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxb3P09026 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxb3P09026 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxb3P09026 Gm28388-201ENSMUST00000186262 437 ntBASIC12.13□□□□□ -0.47
Hoxb3P09026 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Hoxb3P09026 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC12.13□□□□□ -0.47
Hoxb3P09026 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC12.13□□□□□ -0.47
Hoxb3P09026 Gm28455-201ENSMUST00000189105 1290 ntBASIC12.13□□□□□ -0.47
Hoxb3P09026 Gm44038-201ENSMUST00000203952 889 ntBASIC12.13□□□□□ -0.47
Hoxb3P09026 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC12.13□□□□□ -0.47
Hoxb3P09026 Gm18460-201ENSMUST00000208088 464 ntBASIC12.13□□□□□ -0.47
Hoxb3P09026 Gm18041-201ENSMUST00000218210 618 ntBASIC12.13□□□□□ -0.47
Hoxb3P09026 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.13□□□□□ -0.47
Hoxb3P09026 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxb3P09026 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.13□□□□□ -0.47
Hoxb3P09026 Gm22005-201ENSMUST00000082795 141 ntBASIC12.13□□□□□ -0.47
Hoxb3P09026 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxb3P09026 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Hoxb3P09026 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.13□□□□□ -0.47
Hoxb3P09026 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxb3P09026 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxb3P09026 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxb3P09026 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxb3P09026 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxb3P09026 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxb3P09026 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxb3P09026 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxb3P09026 Gm42478-201ENSMUST00000199252 1467 ntBASIC12.13□□□□□ -0.47
Hoxb3P09026 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.13□□□□□ -0.47
Hoxb3P09026 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.13□□□□□ -0.47
Hoxb3P09026 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.13□□□□□ -0.47
Hoxb3P09026 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxb3P09026 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxb3P09026 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxb3P09026 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxb3P09026 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxb3P09026 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxb3P09026 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Hoxb3P09026 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Hoxb3P09026 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb3P09026 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb3P09026 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb3P09026 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb3P09026 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb3P09026 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb3P09026 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.12□□□□□ -0.47
Hoxb3P09026 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb3P09026 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb3P09026 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb3P09026 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb3P09026 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb3P09026 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb3P09026 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb3P09026 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb3P09026 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Hoxb3P09026 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb3P09026 Gm15711-201ENSMUST00000118889 535 ntBASIC12.12□□□□□ -0.47
Hoxb3P09026 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb3P09026 Gm15225-201ENSMUST00000120449 1017 ntBASIC12.12□□□□□ -0.47
Hoxb3P09026 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb3P09026 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb3P09026 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Hoxb3P09026 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb3P09026 Gm11942-201ENSMUST00000180255 345 ntBASIC12.12□□□□□ -0.47
Hoxb3P09026 Gm29615-201ENSMUST00000185371 697 ntBASIC12.12□□□□□ -0.47
Hoxb3P09026 Gm28224-201ENSMUST00000186078 697 ntBASIC12.12□□□□□ -0.47
Hoxb3P09026 Gm29001-201ENSMUST00000186177 697 ntBASIC12.12□□□□□ -0.47
Hoxb3P09026 Gm28292-201ENSMUST00000186593 697 ntBASIC12.12□□□□□ -0.47
Hoxb3P09026 Gm28101-201ENSMUST00000187608 697 ntBASIC12.12□□□□□ -0.47
Hoxb3P09026 Gm29076-201ENSMUST00000187689 697 ntBASIC12.12□□□□□ -0.47
Hoxb3P09026 Gm28302-201ENSMUST00000187931 697 ntBASIC12.12□□□□□ -0.47
Hoxb3P09026 Gm28646-201ENSMUST00000188220 697 ntBASIC12.12□□□□□ -0.47
Hoxb3P09026 Gm28205-201ENSMUST00000189177 697 ntBASIC12.12□□□□□ -0.47
Hoxb3P09026 Gm29032-201ENSMUST00000189797 697 ntBASIC12.12□□□□□ -0.47
Hoxb3P09026 Gm28695-201ENSMUST00000190300 697 ntBASIC12.12□□□□□ -0.47
Hoxb3P09026 Gm37448-201ENSMUST00000192795 697 ntBASIC12.12□□□□□ -0.47
Hoxb3P09026 Gm45399-201ENSMUST00000209955 1016 ntBASIC12.12□□□□□ -0.47
Hoxb3P09026 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.12□□□□□ -0.47
Hoxb3P09026 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb3P09026 Ginm1-202ENSMUST00000065124 300 ntBASIC12.12□□□□□ -0.47
Hoxb3P09026 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb3P09026 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb3P09026 Gm26035-201ENSMUST00000083065 308 ntBASIC12.12□□□□□ -0.47
Hoxb3P09026 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Hoxb3P09026 AC107763.1-201ENSMUST00000226082 1365 ntBASIC12.12□□□□□ -0.47
Hoxb3P09026 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb3P09026 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb3P09026 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.12□□□□□ -0.47
Hoxb3P09026 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb3P09026 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb3P09026 AC151904.4-201ENSMUST00000219868 1319 ntBASIC12.11□□□□□ -0.47
Hoxb3P09026 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxb3P09026 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxb3P09026 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms