Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.17□□□□□ -0.46
PdgfrbP05622 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfrbP05622 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfrbP05622 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfrbP05622 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfrbP05622 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
PdgfrbP05622 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfrbP05622 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfrbP05622 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
PdgfrbP05622 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfrbP05622 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.17□□□□□ -0.46
PdgfrbP05622 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.17□□□□□ -0.46
PdgfrbP05622 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
PdgfrbP05622 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.17□□□□□ -0.46
PdgfrbP05622 Gm17931-201ENSMUST00000208132 634 ntBASIC12.17□□□□□ -0.46
PdgfrbP05622 Gm45696-201ENSMUST00000212088 985 ntBASIC12.17□□□□□ -0.46
PdgfrbP05622 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.17□□□□□ -0.46
PdgfrbP05622 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfrbP05622 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfrbP05622 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.17□□□□□ -0.46
PdgfrbP05622 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfrbP05622 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfrbP05622 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfrbP05622 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
PdgfrbP05622 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
PdgfrbP05622 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfrbP05622 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfrbP05622 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
PdgfrbP05622 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfrbP05622 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfrbP05622 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.17□□□□□ -0.46
PdgfrbP05622 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfrbP05622 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfrbP05622 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.17□□□□□ -0.46
PdgfrbP05622 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
PdgfrbP05622 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.17□□□□□ -0.46
PdgfrbP05622 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfrbP05622 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfrbP05622 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfrbP05622 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfrbP05622 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfrbP05622 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdgfrbP05622 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdgfrbP05622 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
PdgfrbP05622 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
PdgfrbP05622 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.16□□□□□ -0.46
PdgfrbP05622 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.16□□□□□ -0.46
PdgfrbP05622 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdgfrbP05622 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdgfrbP05622 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdgfrbP05622 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdgfrbP05622 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdgfrbP05622 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdgfrbP05622 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdgfrbP05622 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
PdgfrbP05622 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
PdgfrbP05622 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
PdgfrbP05622 Gm17376-201ENSMUST00000166016 84 ntBASIC12.16□□□□□ -0.46
PdgfrbP05622 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
PdgfrbP05622 Gm5706-201ENSMUST00000181525 993 ntBASIC12.16□□□□□ -0.46
PdgfrbP05622 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.16□□□□□ -0.46
PdgfrbP05622 Gm9136-201ENSMUST00000193368 454 ntBASIC12.16□□□□□ -0.46
PdgfrbP05622 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.16□□□□□ -0.46
PdgfrbP05622 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
PdgfrbP05622 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
PdgfrbP05622 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
PdgfrbP05622 Gm45224-201ENSMUST00000208203 414 ntBASIC12.16□□□□□ -0.46
PdgfrbP05622 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.16□□□□□ -0.46
PdgfrbP05622 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdgfrbP05622 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.16□□□□□ -0.46
PdgfrbP05622 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdgfrbP05622 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.16□□□□□ -0.46
PdgfrbP05622 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.16□□□□□ -0.46
PdgfrbP05622 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdgfrbP05622 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdgfrbP05622 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdgfrbP05622 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdgfrbP05622 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.16□□□□□ -0.46
PdgfrbP05622 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdgfrbP05622 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
PdgfrbP05622 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.16□□□□□ -0.46
PdgfrbP05622 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdgfrbP05622 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.16□□□□□ -0.46
PdgfrbP05622 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdgfrbP05622 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdgfrbP05622 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdgfrbP05622 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
PdgfrbP05622 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.16□□□□□ -0.46
PdgfrbP05622 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdgfrbP05622 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdgfrbP05622 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PdgfrbP05622 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
PdgfrbP05622 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PdgfrbP05622 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
PdgfrbP05622 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PdgfrbP05622 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
PdgfrbP05622 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PdgfrbP05622 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PdgfrbP05622 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PdgfrbP05622 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms