Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Hoxa3P02831 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Hoxa3P02831 Gm18227-201ENSMUST00000211082 1468 ntBASIC10.1□□□□□ -0.79
Hoxa3P02831 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Hoxa3P02831 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hoxa3P02831 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.09□□□□□ -0.79
Hoxa3P02831 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.09□□□□□ -0.79
Hoxa3P02831 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hoxa3P02831 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hoxa3P02831 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.09□□□□□ -0.79
Hoxa3P02831 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hoxa3P02831 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hoxa3P02831 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hoxa3P02831 AC126262.1-201ENSMUST00000221802 1904 ntBASIC10.09□□□□□ -0.79
Hoxa3P02831 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hoxa3P02831 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.09□□□□□ -0.79
Hoxa3P02831 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.09□□□□□ -0.79
Hoxa3P02831 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Hoxa3P02831 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hoxa3P02831 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hoxa3P02831 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hoxa3P02831 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hoxa3P02831 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hoxa3P02831 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Hoxa3P02831 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hoxa3P02831 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC10.09□□□□□ -0.79
Hoxa3P02831 Gm11989-201ENSMUST00000117240 672 ntBASIC10.09□□□□□ -0.79
Hoxa3P02831 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC10.09□□□□□ -0.79
Hoxa3P02831 Gm11362-201ENSMUST00000118838 850 ntBASIC10.09□□□□□ -0.79
Hoxa3P02831 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC10.09□□□□□ -0.79
Hoxa3P02831 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.09□□□□□ -0.79
Hoxa3P02831 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Hoxa3P02831 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hoxa3P02831 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hoxa3P02831 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Hoxa3P02831 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC10.09□□□□□ -0.79
Hoxa3P02831 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hoxa3P02831 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hoxa3P02831 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hoxa3P02831 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hoxa3P02831 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Hoxa3P02831 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Hoxa3P02831 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hoxa3P02831 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC10.09□□□□□ -0.79
Hoxa3P02831 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hoxa3P02831 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hoxa3P02831 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC10.09□□□□□ -0.79
Hoxa3P02831 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hoxa3P02831 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Hoxa3P02831 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.09□□□□□ -0.79
Hoxa3P02831 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hoxa3P02831 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hoxa3P02831 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hoxa3P02831 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hoxa3P02831 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Hoxa3P02831 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Hoxa3P02831 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hoxa3P02831 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hoxa3P02831 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hoxa3P02831 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Hoxa3P02831 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Hoxa3P02831 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hoxa3P02831 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.08□□□□□ -0.8
Hoxa3P02831 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.08□□□□□ -0.8
Hoxa3P02831 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hoxa3P02831 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hoxa3P02831 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hoxa3P02831 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hoxa3P02831 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hoxa3P02831 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Hoxa3P02831 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hoxa3P02831 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Hoxa3P02831 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Hoxa3P02831 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC10.08□□□□□ -0.8
Hoxa3P02831 Gm23949-201ENSMUST00000104027 127 ntBASIC10.08□□□□□ -0.8
Hoxa3P02831 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Hoxa3P02831 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Hoxa3P02831 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC10.08□□□□□ -0.8
Hoxa3P02831 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Hoxa3P02831 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC10.08□□□□□ -0.8
Hoxa3P02831 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Hoxa3P02831 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Hoxa3P02831 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC10.08□□□□□ -0.8
Hoxa3P02831 AY036118-201ENSMUST00000200021 923 ntBASIC10.08□□□□□ -0.8
Hoxa3P02831 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC10.08□□□□□ -0.8
Hoxa3P02831 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Hoxa3P02831 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC10.08□□□□□ -0.8
Hoxa3P02831 Nsd1-205ENSMUST00000224693 852 ntBASIC10.08□□□□□ -0.8
Hoxa3P02831 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hoxa3P02831 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hoxa3P02831 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.08□□□□□ -0.8
Hoxa3P02831 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hoxa3P02831 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hoxa3P02831 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hoxa3P02831 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hoxa3P02831 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.08□□□□□ -0.8
Hoxa3P02831 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hoxa3P02831 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
Hoxa3P02831 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hoxa3P02831 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms