Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
TcraP01849 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
TcraP01849 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
TcraP01849 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
TcraP01849 Mir7654-201ENSMUST00000185082 70 ntBASIC8.75□□□□□ -1.01
TcraP01849 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC8.75□□□□□ -1.01
TcraP01849 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC8.75□□□□□ -1.01
TcraP01849 AC125117.1-201ENSMUST00000228121 468 ntBASIC8.75□□□□□ -1.01
TcraP01849 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
TcraP01849 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC8.75□□□□□ -1.01
TcraP01849 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
TcraP01849 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC8.75□□□□□ -1.01
TcraP01849 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC8.75□□□□□ -1.01
TcraP01849 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
TcraP01849 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
TcraP01849 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
TcraP01849 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
TcraP01849 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
TcraP01849 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC8.75□□□□□ -1.01
TcraP01849 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
TcraP01849 Gm43937-201ENSMUST00000204640 3122 ntBASIC8.75□□□□□ -1.01
TcraP01849 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC8.75□□□□□ -1.01
TcraP01849 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
TcraP01849 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
TcraP01849 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
TcraP01849 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
TcraP01849 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
TcraP01849 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
TcraP01849 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
TcraP01849 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
TcraP01849 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
TcraP01849 Gm9361-201ENSMUST00000198695 1507 ntBASIC8.75□□□□□ -1.01
TcraP01849 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
TcraP01849 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
TcraP01849 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
TcraP01849 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TcraP01849 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC8.74□□□□□ -1.01
TcraP01849 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TcraP01849 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
TcraP01849 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TcraP01849 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
TcraP01849 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC8.74□□□□□ -1.01
TcraP01849 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TcraP01849 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC8.74□□□□□ -1.01
TcraP01849 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TcraP01849 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TcraP01849 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
TcraP01849 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TcraP01849 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
TcraP01849 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC8.74□□□□□ -1.01
TcraP01849 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
TcraP01849 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC8.74□□□□□ -1.01
TcraP01849 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
TcraP01849 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
TcraP01849 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
TcraP01849 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC8.74□□□□□ -1.01
TcraP01849 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
TcraP01849 Gm14921-201ENSMUST00000118643 908 ntBASIC8.74□□□□□ -1.01
TcraP01849 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
TcraP01849 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC8.74□□□□□ -1.01
TcraP01849 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC8.74□□□□□ -1.01
TcraP01849 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TcraP01849 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC8.74□□□□□ -1.01
TcraP01849 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
TcraP01849 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TcraP01849 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC8.74□□□□□ -1.01
TcraP01849 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
TcraP01849 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC8.74□□□□□ -1.01
TcraP01849 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC8.74□□□□□ -1.01
TcraP01849 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TcraP01849 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TcraP01849 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TcraP01849 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TcraP01849 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
TcraP01849 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TcraP01849 Gm2423-201ENSMUST00000074863 733 ntBASIC8.74□□□□□ -1.01
TcraP01849 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TcraP01849 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TcraP01849 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
TcraP01849 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TcraP01849 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TcraP01849 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
TcraP01849 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
TcraP01849 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TcraP01849 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TcraP01849 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TcraP01849 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
TcraP01849 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TcraP01849 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
TcraP01849 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TcraP01849 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC8.74□□□□□ -1.01
TcraP01849 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TcraP01849 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC8.74□□□□□ -1.01
TcraP01849 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC8.73□□□□□ -1.01
TcraP01849 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC8.73□□□□□ -1.01
TcraP01849 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
TcraP01849 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
TcraP01849 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
TcraP01849 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
TcraP01849 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms