Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vti1aO89116 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vti1aO89116 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vti1aO89116 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vti1aO89116 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vti1aO89116 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vti1aO89116 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vti1aO89116 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.96□□□□□ -0.33
Vti1aO89116 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.96□□□□□ -0.33
Vti1aO89116 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vti1aO89116 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vti1aO89116 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vti1aO89116 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vti1aO89116 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vti1aO89116 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vti1aO89116 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Vti1aO89116 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Vti1aO89116 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Vti1aO89116 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.96□□□□□ -0.33
Vti1aO89116 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vti1aO89116 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vti1aO89116 Gm19353-201ENSMUST00000184561 445 ntBASIC12.96□□□□□ -0.33
Vti1aO89116 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.96□□□□□ -0.33
Vti1aO89116 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.96□□□□□ -0.33
Vti1aO89116 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vti1aO89116 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.96□□□□□ -0.33
Vti1aO89116 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.96□□□□□ -0.33
Vti1aO89116 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.96□□□□□ -0.33
Vti1aO89116 AC122876.1-201ENSMUST00000217619 825 ntBASIC12.96□□□□□ -0.33
Vti1aO89116 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC12.96□□□□□ -0.33
Vti1aO89116 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vti1aO89116 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC12.96□□□□□ -0.33
Vti1aO89116 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Vti1aO89116 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Vti1aO89116 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vti1aO89116 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vti1aO89116 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vti1aO89116 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vti1aO89116 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Vti1aO89116 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Vti1aO89116 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Vti1aO89116 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Vti1aO89116 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vti1aO89116 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vti1aO89116 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vti1aO89116 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.96□□□□□ -0.34
Vti1aO89116 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Vti1aO89116 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vti1aO89116 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vti1aO89116 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Vti1aO89116 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1aO89116 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1aO89116 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1aO89116 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1aO89116 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Vti1aO89116 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1aO89116 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1aO89116 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1aO89116 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.95□□□□□ -0.34
Vti1aO89116 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1aO89116 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1aO89116 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Vti1aO89116 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Vti1aO89116 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1aO89116 Gm13035-201ENSMUST00000117496 342 ntBASIC12.95□□□□□ -0.34
Vti1aO89116 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.95□□□□□ -0.34
Vti1aO89116 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.95□□□□□ -0.34
Vti1aO89116 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.95□□□□□ -0.34
Vti1aO89116 Gm5369-201ENSMUST00000217499 588 ntBASIC12.95□□□□□ -0.34
Vti1aO89116 AC125486.1-201ENSMUST00000218701 320 ntBASIC12.95□□□□□ -0.34
Vti1aO89116 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1aO89116 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Vti1aO89116 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1aO89116 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1aO89116 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1aO89116 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1aO89116 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1aO89116 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1aO89116 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC12.95□□□□□ -0.34
Vti1aO89116 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1aO89116 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1aO89116 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1aO89116 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1aO89116 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.95□□□□□ -0.34
Vti1aO89116 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1aO89116 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vti1aO89116 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.94□□□□□ -0.34
Vti1aO89116 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vti1aO89116 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Vti1aO89116 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vti1aO89116 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Vti1aO89116 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vti1aO89116 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vti1aO89116 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vti1aO89116 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Vti1aO89116 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vti1aO89116 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Vti1aO89116 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.94□□□□□ -0.34
Vti1aO89116 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC12.94□□□□□ -0.34
Vti1aO89116 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms