Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.07□□□□□ -0.64
Cops4O88544 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cops4O88544 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cops4O88544 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cops4O88544 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Cops4O88544 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cops4O88544 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Cops4O88544 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cops4O88544 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Cops4O88544 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cops4O88544 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cops4O88544 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Cops4O88544 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cops4O88544 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cops4O88544 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Cops4O88544 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cops4O88544 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cops4O88544 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cops4O88544 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cops4O88544 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.06□□□□□ -0.64
Cops4O88544 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cops4O88544 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cops4O88544 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cops4O88544 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cops4O88544 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cops4O88544 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cops4O88544 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Cops4O88544 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.06□□□□□ -0.64
Cops4O88544 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.06□□□□□ -0.64
Cops4O88544 Gm12363-201ENSMUST00000122250 668 ntBASIC11.06□□□□□ -0.64
Cops4O88544 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cops4O88544 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.06□□□□□ -0.64
Cops4O88544 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cops4O88544 Gm29649-201ENSMUST00000185649 419 ntBASIC11.06□□□□□ -0.64
Cops4O88544 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cops4O88544 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.06□□□□□ -0.64
Cops4O88544 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.06□□□□□ -0.64
Cops4O88544 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.06□□□□□ -0.64
Cops4O88544 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cops4O88544 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.06□□□□□ -0.64
Cops4O88544 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.06□□□□□ -0.64
Cops4O88544 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cops4O88544 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cops4O88544 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cops4O88544 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.06□□□□□ -0.64
Cops4O88544 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cops4O88544 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cops4O88544 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cops4O88544 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cops4O88544 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cops4O88544 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cops4O88544 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Cops4O88544 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cops4O88544 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cops4O88544 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cops4O88544 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cops4O88544 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cops4O88544 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Cops4O88544 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cops4O88544 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.06□□□□□ -0.64
Cops4O88544 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Cops4O88544 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.05□□□□□ -0.64
Cops4O88544 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Cops4O88544 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cops4O88544 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Cops4O88544 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cops4O88544 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.05□□□□□ -0.64
Cops4O88544 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cops4O88544 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Cops4O88544 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
Cops4O88544 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cops4O88544 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cops4O88544 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.05□□□□□ -0.64
Cops4O88544 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cops4O88544 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cops4O88544 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cops4O88544 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cops4O88544 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cops4O88544 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cops4O88544 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Cops4O88544 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Cops4O88544 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.05□□□□□ -0.64
Cops4O88544 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cops4O88544 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.05□□□□□ -0.64
Cops4O88544 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.05□□□□□ -0.64
Cops4O88544 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cops4O88544 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cops4O88544 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cops4O88544 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cops4O88544 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cops4O88544 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Cops4O88544 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cops4O88544 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cops4O88544 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cops4O88544 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.05□□□□□ -0.64
Cops4O88544 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Cops4O88544 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cops4O88544 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Cops4O88544 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
Cops4O88544 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms