Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarce1O54941 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarce1O54941 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarce1O54941 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC14.24□□□□□ -0.13
Smarce1O54941 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarce1O54941 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smarce1O54941 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC14.24□□□□□ -0.13
Smarce1O54941 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarce1O54941 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarce1O54941 Gm43773-201ENSMUST00000198548 2162 ntBASIC14.23□□□□□ -0.13
Smarce1O54941 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Smarce1O54941 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarce1O54941 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarce1O54941 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarce1O54941 Gm5370-201ENSMUST00000187187 574 ntBASIC14.23□□□□□ -0.13
Smarce1O54941 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC14.23□□□□□ -0.13
Smarce1O54941 Gm19963-201ENSMUST00000208413 1255 ntBASIC14.23□□□□□ -0.13
Smarce1O54941 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarce1O54941 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarce1O54941 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smarce1O54941 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Smarce1O54941 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarce1O54941 AC124397.2-201ENSMUST00000225575 2215 ntBASIC14.23□□□□□ -0.13
Smarce1O54941 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smarce1O54941 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarce1O54941 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smarce1O54941 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smarce1O54941 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Smarce1O54941 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarce1O54941 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarce1O54941 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smarce1O54941 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarce1O54941 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.22□□□□□ -0.13
Smarce1O54941 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarce1O54941 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarce1O54941 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarce1O54941 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarce1O54941 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarce1O54941 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarce1O54941 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarce1O54941 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smarce1O54941 AC126257.1-201ENSMUST00000213195 1536 ntBASIC14.22□□□□□ -0.13
Smarce1O54941 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smarce1O54941 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarce1O54941 Gm15824-201ENSMUST00000119516 955 ntBASIC14.22□□□□□ -0.13
Smarce1O54941 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Smarce1O54941 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC14.22□□□□□ -0.13
Smarce1O54941 Mospd4-201ENSMUST00000180618 576 ntBASIC14.22□□□□□ -0.13
Smarce1O54941 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC14.22□□□□□ -0.13
Smarce1O54941 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smarce1O54941 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.22□□□□□ -0.13
Smarce1O54941 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC14.22□□□□□ -0.13
Smarce1O54941 Gm19994-201ENSMUST00000217086 586 ntBASIC14.22□□□□□ -0.13
Smarce1O54941 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.22□□□□□ -0.13
Smarce1O54941 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarce1O54941 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Smarce1O54941 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Smarce1O54941 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarce1O54941 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarce1O54941 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarce1O54941 AC164426.2-201ENSMUST00000225993 2492 ntBASIC14.22□□□□□ -0.13
Smarce1O54941 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC14.22□□□□□ -0.13
Smarce1O54941 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarce1O54941 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC14.22□□□□□ -0.13
Smarce1O54941 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarce1O54941 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Smarce1O54941 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Smarce1O54941 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Smarce1O54941 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smarce1O54941 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC14.22□□□□□ -0.13
Smarce1O54941 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarce1O54941 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarce1O54941 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarce1O54941 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
Smarce1O54941 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smarce1O54941 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarce1O54941 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarce1O54941 Gm11424-201ENSMUST00000121929 829 ntBASIC14.21□□□□□ -0.13
Smarce1O54941 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smarce1O54941 Gm24845-201ENSMUST00000158034 109 ntBASIC14.21□□□□□ -0.13
Smarce1O54941 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC14.21□□□□□ -0.13
Smarce1O54941 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smarce1O54941 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarce1O54941 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC14.21□□□□□ -0.13
Smarce1O54941 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarce1O54941 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarce1O54941 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarce1O54941 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarce1O54941 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smarce1O54941 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Smarce1O54941 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC14.2□□□□□ -0.14
Smarce1O54941 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarce1O54941 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Smarce1O54941 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC14.2□□□□□ -0.14
Smarce1O54941 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarce1O54941 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Smarce1O54941 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarce1O54941 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarce1O54941 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Smarce1O54941 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms