Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf11bO08712 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Tnfrsf11bO08712 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Tnfrsf11bO08712 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.16□□□□□ -0.46
Tnfrsf11bO08712 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Tnfrsf11bO08712 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf11bO08712 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf11bO08712 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf11bO08712 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Tnfrsf11bO08712 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.16□□□□□ -0.46
Tnfrsf11bO08712 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf11bO08712 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf11bO08712 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf11bO08712 Gm14644-201ENSMUST00000116671 647 ntBASIC12.16□□□□□ -0.46
Tnfrsf11bO08712 Gm12957-201ENSMUST00000117835 377 ntBASIC12.16□□□□□ -0.46
Tnfrsf11bO08712 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.16□□□□□ -0.46
Tnfrsf11bO08712 Gm14441-201ENSMUST00000121960 540 ntBASIC12.16□□□□□ -0.46
Tnfrsf11bO08712 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Tnfrsf11bO08712 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf11bO08712 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.16□□□□□ -0.46
Tnfrsf11bO08712 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.16□□□□□ -0.46
Tnfrsf11bO08712 Gm27572-201ENSMUST00000183702 255 ntBASIC12.16□□□□□ -0.46
Tnfrsf11bO08712 Gm18893-201ENSMUST00000198416 943 ntBASIC12.16□□□□□ -0.46
Tnfrsf11bO08712 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf11bO08712 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Tnfrsf11bO08712 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf11bO08712 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.16□□□□□ -0.46
Tnfrsf11bO08712 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.16□□□□□ -0.46
Tnfrsf11bO08712 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf11bO08712 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.16□□□□□ -0.46
Tnfrsf11bO08712 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf11bO08712 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Tnfrsf11bO08712 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.16□□□□□ -0.46
Tnfrsf11bO08712 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf11bO08712 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.16□□□□□ -0.46
Tnfrsf11bO08712 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.16□□□□□ -0.46
Tnfrsf11bO08712 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Tnfrsf11bO08712 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Tnfrsf11bO08712 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Tnfrsf11bO08712 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf11bO08712 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.15□□□□□ -0.46
Tnfrsf11bO08712 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.15□□□□□ -0.46
Tnfrsf11bO08712 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf11bO08712 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf11bO08712 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf11bO08712 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf11bO08712 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.15□□□□□ -0.46
Tnfrsf11bO08712 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf11bO08712 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf11bO08712 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Tnfrsf11bO08712 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf11bO08712 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf11bO08712 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf11bO08712 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf11bO08712 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.15□□□□□ -0.46
Tnfrsf11bO08712 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.15□□□□□ -0.46
Tnfrsf11bO08712 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Tnfrsf11bO08712 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf11bO08712 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf11bO08712 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf11bO08712 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Tnfrsf11bO08712 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Tnfrsf11bO08712 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf11bO08712 Gm30285-201ENSMUST00000214614 422 ntBASIC12.15□□□□□ -0.46
Tnfrsf11bO08712 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf11bO08712 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf11bO08712 Gm25857-201ENSMUST00000082788 129 ntBASIC12.15□□□□□ -0.46
Tnfrsf11bO08712 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Tnfrsf11bO08712 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf11bO08712 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.15□□□□□ -0.46
Tnfrsf11bO08712 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf11bO08712 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.15□□□□□ -0.46
Tnfrsf11bO08712 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.15□□□□□ -0.46
Tnfrsf11bO08712 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.15□□□□□ -0.47
Tnfrsf11bO08712 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf11bO08712 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf11bO08712 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf11bO08712 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf11bO08712 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf11bO08712 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf11bO08712 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.14□□□□□ -0.47
Tnfrsf11bO08712 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf11bO08712 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf11bO08712 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf11bO08712 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Tnfrsf11bO08712 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Tnfrsf11bO08712 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.14□□□□□ -0.47
Tnfrsf11bO08712 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Tnfrsf11bO08712 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Tnfrsf11bO08712 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf11bO08712 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf11bO08712 Gm15547-201ENSMUST00000122152 333 ntBASIC12.14□□□□□ -0.47
Tnfrsf11bO08712 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.14□□□□□ -0.47
Tnfrsf11bO08712 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfrsf11bO08712 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.14□□□□□ -0.47
Tnfrsf11bO08712 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.14□□□□□ -0.47
Tnfrsf11bO08712 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.14□□□□□ -0.47
Tnfrsf11bO08712 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.14□□□□□ -0.47
Tnfrsf11bO08712 Gm9230-201ENSMUST00000188228 532 ntBASIC12.14□□□□□ -0.47
Tnfrsf11bO08712 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms