Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Shank1D3YZU1 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Shank1D3YZU1 AC159376.1-201ENSMUST00000218504 630 ntBASIC10.76□□□□□ -0.69
Shank1D3YZU1 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC10.76□□□□□ -0.69
Shank1D3YZU1 AC122350.1-201ENSMUST00000228135 533 ntBASIC10.76□□□□□ -0.69
Shank1D3YZU1 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.76□□□□□ -0.69
Shank1D3YZU1 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC10.76□□□□□ -0.69
Shank1D3YZU1 AC124433.1-201ENSMUST00000224483 1063 ntBASIC10.76□□□□□ -0.69
Shank1D3YZU1 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Shank1D3YZU1 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shank1D3YZU1 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Shank1D3YZU1 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Shank1D3YZU1 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.75□□□□□ -0.69
Shank1D3YZU1 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Shank1D3YZU1 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Shank1D3YZU1 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Shank1D3YZU1 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Shank1D3YZU1 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Shank1D3YZU1 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Shank1D3YZU1 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC10.75□□□□□ -0.69
Shank1D3YZU1 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Shank1D3YZU1 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC10.75□□□□□ -0.69
Shank1D3YZU1 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Shank1D3YZU1 Gm12990-201ENSMUST00000120372 468 ntBASIC10.75□□□□□ -0.69
Shank1D3YZU1 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.75□□□□□ -0.69
Shank1D3YZU1 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Shank1D3YZU1 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC10.75□□□□□ -0.69
Shank1D3YZU1 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
Shank1D3YZU1 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC10.75□□□□□ -0.69
Shank1D3YZU1 Gm44421-201ENSMUST00000205064 1221 ntBASIC10.75□□□□□ -0.69
Shank1D3YZU1 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC10.75□□□□□ -0.69
Shank1D3YZU1 AC115122.1-201ENSMUST00000224850 1040 ntBASIC10.75□□□□□ -0.69
Shank1D3YZU1 Gm10371-202ENSMUST00000228010 1081 ntBASIC10.75□□□□□ -0.69
Shank1D3YZU1 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Shank1D3YZU1 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC10.75□□□□□ -0.69
Shank1D3YZU1 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Shank1D3YZU1 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Shank1D3YZU1 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Shank1D3YZU1 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Shank1D3YZU1 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Shank1D3YZU1 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.75□□□□□ -0.69
Shank1D3YZU1 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Shank1D3YZU1 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Shank1D3YZU1 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Shank1D3YZU1 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Shank1D3YZU1 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Shank1D3YZU1 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Shank1D3YZU1 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Shank1D3YZU1 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Shank1D3YZU1 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Shank1D3YZU1 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Shank1D3YZU1 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Shank1D3YZU1 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Shank1D3YZU1 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 153.2 ms