Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 2810403D21Rik-204ENSMUST00000144421 747 ntTSL 3 BASIC9.64□□□□□ -0.87
Chd6A3KFM7 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC9.64□□□□□ -0.87
Chd6A3KFM7 Mir6359-201ENSMUST00000183668 81 ntBASIC9.64□□□□□ -0.87
Chd6A3KFM7 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Chd6A3KFM7 Rpl10-ps5-201ENSMUST00000212707 642 ntBASIC9.64□□□□□ -0.87
Chd6A3KFM7 AC114645.2-201ENSMUST00000214308 791 ntTSL 3 BASIC9.64□□□□□ -0.87
Chd6A3KFM7 Gm3379-201ENSMUST00000222259 642 ntBASIC9.64□□□□□ -0.87
Chd6A3KFM7 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Chd6A3KFM7 Gm43807-201ENSMUST00000200678 1781 ntBASIC9.64□□□□□ -0.87
Chd6A3KFM7 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Chd6A3KFM7 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Chd6A3KFM7 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Chd6A3KFM7 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Chd6A3KFM7 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Chd6A3KFM7 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Chd6A3KFM7 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Chd6A3KFM7 Gm13608-201ENSMUST00000121807 1406 ntBASIC9.64□□□□□ -0.87
Chd6A3KFM7 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Chd6A3KFM7 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Chd6A3KFM7 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Chd6A3KFM7 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Chd6A3KFM7 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Chd6A3KFM7 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Chd6A3KFM7 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Chd6A3KFM7 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Chd6A3KFM7 Gm11660-201ENSMUST00000120955 412 ntBASIC9.64□□□□□ -0.87
Chd6A3KFM7 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Chd6A3KFM7 AC107752.1-201ENSMUST00000219362 469 ntBASIC9.64□□□□□ -0.87
Chd6A3KFM7 AC161374.2-201ENSMUST00000223662 596 ntBASIC9.64□□□□□ -0.87
Chd6A3KFM7 AC121567.1-201ENSMUST00000227213 842 ntBASIC9.64□□□□□ -0.87
Chd6A3KFM7 Bpifa5-201ENSMUST00000028986 1089 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Chd6A3KFM7 Rps4l-ps-201ENSMUST00000059737 768 ntBASIC9.64□□□□□ -0.87
Chd6A3KFM7 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Chd6A3KFM7 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC9.64□□□□□ -0.87
Chd6A3KFM7 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Chd6A3KFM7 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Chd6A3KFM7 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC9.64□□□□□ -0.87
Chd6A3KFM7 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Chd6A3KFM7 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Chd6A3KFM7 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Chd6A3KFM7 Gm10176-201ENSMUST00000159707 2264 ntBASIC9.64□□□□□ -0.87
Chd6A3KFM7 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Chd6A3KFM7 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Chd6A3KFM7 4933405D12Rik-201ENSMUST00000180557 1383 ntTSL 2 BASIC9.64□□□□□ -0.87
Chd6A3KFM7 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Chd6A3KFM7 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Chd6A3KFM7 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Chd6A3KFM7 Ighv5-8-202ENSMUST00000191967 337 ntBASIC9.63□□□□□ -0.87
Chd6A3KFM7 Rps25-205ENSMUST00000216867 577 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Chd6A3KFM7 Zfp389-202ENSMUST00000224437 1234 ntBASIC9.63□□□□□ -0.87
Chd6A3KFM7 3110083C13Rik-202ENSMUST00000224786 907 ntBASIC9.63□□□□□ -0.87
Chd6A3KFM7 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Chd6A3KFM7 Fxyd1-201ENSMUST00000039909 620 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Chd6A3KFM7 Gm23105-201ENSMUST00000083719 134 ntBASIC9.63□□□□□ -0.87
Chd6A3KFM7 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Chd6A3KFM7 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Chd6A3KFM7 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Chd6A3KFM7 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC9.63□□□□□ -0.87
Chd6A3KFM7 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Chd6A3KFM7 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Chd6A3KFM7 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Chd6A3KFM7 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Chd6A3KFM7 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Chd6A3KFM7 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Chd6A3KFM7 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Chd6A3KFM7 Gm42970-201ENSMUST00000196407 1352 ntBASIC9.63□□□□□ -0.87
Chd6A3KFM7 Rnf17-202ENSMUST00000223627 2077 ntBASIC9.63□□□□□ -0.87
Chd6A3KFM7 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Chd6A3KFM7 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Chd6A3KFM7 1700092E19Rik-202ENSMUST00000154703 1650 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Chd6A3KFM7 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Chd6A3KFM7 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC9.63□□□□□ -0.87
Chd6A3KFM7 Gm15489-201ENSMUST00000132811 973 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Chd6A3KFM7 Pttg1ip-208ENSMUST00000162943 721 ntAPPRIS ALT2 TSL 3 BASIC9.63□□□□□ -0.87
Chd6A3KFM7 Rwdd2a-203ENSMUST00000185566 1054 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
Chd6A3KFM7 Gm28180-201ENSMUST00000189608 722 ntBASIC9.63□□□□□ -0.87
Chd6A3KFM7 Gm37009-201ENSMUST00000193297 361 ntBASIC9.63□□□□□ -0.87
Chd6A3KFM7 AC166902.2-202ENSMUST00000213191 1038 ntTSL 5 BASIC9.63□□□□□ -0.87
Chd6A3KFM7 Gm2594-201ENSMUST00000214774 742 ntBASIC9.63□□□□□ -0.87
Chd6A3KFM7 Gm6859-201ENSMUST00000218614 989 ntBASIC9.63□□□□□ -0.87
Chd6A3KFM7 CT009546.1-201ENSMUST00000222573 1120 ntBASIC9.63□□□□□ -0.87
Chd6A3KFM7 AC164978.2-201ENSMUST00000226645 857 ntBASIC9.63□□□□□ -0.87
Chd6A3KFM7 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Chd6A3KFM7 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC9.63□□□□□ -0.87
Chd6A3KFM7 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Chd6A3KFM7 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Chd6A3KFM7 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Chd6A3KFM7 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Chd6A3KFM7 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC9.63□□□□□ -0.87
Chd6A3KFM7 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Chd6A3KFM7 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
Chd6A3KFM7 AC122335.2-201ENSMUST00000213901 6181 ntBASIC9.63□□□□□ -0.87
Chd6A3KFM7 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.87
Chd6A3KFM7 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Chd6A3KFM7 Gm8899-201ENSMUST00000214635 1332 ntBASIC9.63□□□□□ -0.87
Chd6A3KFM7 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Chd6A3KFM7 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Chd6A3KFM7 Saxo2-205ENSMUST00000207693 1927 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Chd6A3KFM7 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Chd6A3KFM7 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms