Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Phactr1-214ENSMUST00000149235 2076 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Gm37012-201ENSMUST00000194991 1078 ntBASIC6.14□□□□□ -1.43
Ubr4A2AN08 Gm9409-201ENSMUST00000197017 316 ntBASIC6.14□□□□□ -1.43
Ubr4A2AN08 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Hsdl2-202ENSMUST00000107528 2626 ntTSL 2 BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Smok3c-202ENSMUST00000178402 1515 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ubr4A2AN08 Gm5740-201ENSMUST00000211003 1857 ntBASIC6.14□□□□□ -1.43
Ubr4A2AN08 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ubr4A2AN08 AC113060.1-201ENSMUST00000225689 1573 ntBASIC6.14□□□□□ -1.43
Ubr4A2AN08 Gm14983-201ENSMUST00000121551 323 ntBASIC6.13□□□□□ -1.43
Ubr4A2AN08 Gm9458-201ENSMUST00000135273 727 ntBASIC6.13□□□□□ -1.43
Ubr4A2AN08 Gm5808-201ENSMUST00000178090 357 ntBASIC6.13□□□□□ -1.43
Ubr4A2AN08 Gm6291-201ENSMUST00000179994 309 ntBASIC6.13□□□□□ -1.43
Ubr4A2AN08 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Ubr4A2AN08 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC6.13□□□□□ -1.43
Ubr4A2AN08 Gm7790-201ENSMUST00000118716 1310 ntBASIC6.13□□□□□ -1.43
Ubr4A2AN08 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Gm8798-201ENSMUST00000211877 1661 ntBASIC6.13□□□□□ -1.43
Ubr4A2AN08 Rdh7-201ENSMUST00000047199 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Gm6276-201ENSMUST00000120159 579 ntBASIC6.13□□□□□ -1.43
Ubr4A2AN08 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Gm18711-201ENSMUST00000199341 750 ntBASIC6.13□□□□□ -1.43
Ubr4A2AN08 Gm17768-201ENSMUST00000201257 378 ntTSL 5 BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Gm44140-201ENSMUST00000204157 675 ntTSL 3 BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Crisp4-203ENSMUST00000115344 960 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Gm13768-201ENSMUST00000116469 929 ntBASIC6.13□□□□□ -1.43
Ubr4A2AN08 Gm12240-201ENSMUST00000120178 229 ntBASIC6.13□□□□□ -1.43
Ubr4A2AN08 Gm6238-201ENSMUST00000120999 465 ntBASIC6.13□□□□□ -1.43
Ubr4A2AN08 Gm42952-204ENSMUST00000198572 408 ntTSL 3 BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Plac9b-201ENSMUST00000100809 388 ntTSL 2 BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Tomm5-203ENSMUST00000107809 738 ntTSL 3 BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Gm25319-201ENSMUST00000122552 325 ntBASIC6.13□□□□□ -1.43
Ubr4A2AN08 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Gm21083-201ENSMUST00000188807 1141 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 CT033781.3-201ENSMUST00000221886 504 ntTSL 2 BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Id2-203ENSMUST00000222667 958 ntBASIC6.13□□□□□ -1.43
Ubr4A2AN08 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ubr4A2AN08 Gm6024-201ENSMUST00000117850 1558 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms