Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Cldn6Q9Z262 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cldn6Q9Z262 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cldn6Q9Z262 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cldn6Q9Z262 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Cldn6Q9Z262 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cldn6Q9Z262 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cldn6Q9Z262 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
Cldn6Q9Z262 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Cldn6Q9Z262 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cldn6Q9Z262 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cldn6Q9Z262 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cldn6Q9Z262 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cldn6Q9Z262 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cldn6Q9Z262 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cldn6Q9Z262 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cldn6Q9Z262 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.37■□□□□ 0.69
Cldn6Q9Z262 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.37■□□□□ 0.69
Cldn6Q9Z262 Gm10399-202ENSMUST00000202768 748 ntBASIC19.37■□□□□ 0.69
Cldn6Q9Z262 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.37■□□□□ 0.69
Cldn6Q9Z262 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Cldn6Q9Z262 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cldn6Q9Z262 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn6Q9Z262 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.36■□□□□ 0.69
Cldn6Q9Z262 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn6Q9Z262 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn6Q9Z262 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn6Q9Z262 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.36■□□□□ 0.69
Cldn6Q9Z262 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Cldn6Q9Z262 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn6Q9Z262 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn6Q9Z262 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Cldn6Q9Z262 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn6Q9Z262 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn6Q9Z262 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.35■□□□□ 0.69
Cldn6Q9Z262 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn6Q9Z262 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn6Q9Z262 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn6Q9Z262 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Cldn6Q9Z262 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.35■□□□□ 0.69
Cldn6Q9Z262 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.35■□□□□ 0.69
Cldn6Q9Z262 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Cldn6Q9Z262 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn6Q9Z262 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn6Q9Z262 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn6Q9Z262 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.34■□□□□ 0.69
Cldn6Q9Z262 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn6Q9Z262 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Cldn6Q9Z262 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Cldn6Q9Z262 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.34■□□□□ 0.69
Cldn6Q9Z262 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Cldn6Q9Z262 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cldn6Q9Z262 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cldn6Q9Z262 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.33■□□□□ 0.69
Cldn6Q9Z262 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.33■□□□□ 0.69
Cldn6Q9Z262 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Cldn6Q9Z262 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cldn6Q9Z262 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cldn6Q9Z262 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cldn6Q9Z262 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cldn6Q9Z262 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Cldn6Q9Z262 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn6Q9Z262 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn6Q9Z262 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn6Q9Z262 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn6Q9Z262 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn6Q9Z262 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Cldn6Q9Z262 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn6Q9Z262 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn6Q9Z262 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn6Q9Z262 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn6Q9Z262 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cldn6Q9Z262 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.31■□□□□ 0.68
Cldn6Q9Z262 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn6Q9Z262 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn6Q9Z262 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn6Q9Z262 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn6Q9Z262 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn6Q9Z262 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn6Q9Z262 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn6Q9Z262 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Cldn6Q9Z262 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn6Q9Z262 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.3■□□□□ 0.68
Cldn6Q9Z262 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.3■□□□□ 0.68
Cldn6Q9Z262 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn6Q9Z262 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn6Q9Z262 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.29■□□□□ 0.68
Cldn6Q9Z262 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.29■□□□□ 0.68
Cldn6Q9Z262 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cldn6Q9Z262 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cldn6Q9Z262 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cldn6Q9Z262 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cldn6Q9Z262 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cldn6Q9Z262 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.29■□□□□ 0.68
Cldn6Q9Z262 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Cldn6Q9Z262 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cldn6Q9Z262 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn6Q9Z262 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn6Q9Z262 Gm15820-201ENSMUST00000201566 728 ntBASIC19.28■□□□□ 0.68
Cldn6Q9Z262 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms