Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.68■□□□□ 0.58
Clcf1Q9QZM3 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clcf1Q9QZM3 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clcf1Q9QZM3 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clcf1Q9QZM3 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.67■□□□□ 0.58
Clcf1Q9QZM3 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Clcf1Q9QZM3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clcf1Q9QZM3 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clcf1Q9QZM3 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Clcf1Q9QZM3 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clcf1Q9QZM3 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.66■□□□□ 0.58
Clcf1Q9QZM3 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Clcf1Q9QZM3 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Clcf1Q9QZM3 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clcf1Q9QZM3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clcf1Q9QZM3 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Clcf1Q9QZM3 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clcf1Q9QZM3 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Clcf1Q9QZM3 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clcf1Q9QZM3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.65■□□□□ 0.58
Clcf1Q9QZM3 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Clcf1Q9QZM3 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clcf1Q9QZM3 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clcf1Q9QZM3 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Clcf1Q9QZM3 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Clcf1Q9QZM3 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
Clcf1Q9QZM3 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Clcf1Q9QZM3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Clcf1Q9QZM3 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.64■□□□□ 0.57
Clcf1Q9QZM3 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clcf1Q9QZM3 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.64■□□□□ 0.57
Clcf1Q9QZM3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clcf1Q9QZM3 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcf1Q9QZM3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcf1Q9QZM3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Clcf1Q9QZM3 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Clcf1Q9QZM3 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.62■□□□□ 0.57
Clcf1Q9QZM3 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clcf1Q9QZM3 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clcf1Q9QZM3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clcf1Q9QZM3 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clcf1Q9QZM3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Clcf1Q9QZM3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clcf1Q9QZM3 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clcf1Q9QZM3 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clcf1Q9QZM3 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Clcf1Q9QZM3 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clcf1Q9QZM3 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Clcf1Q9QZM3 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Clcf1Q9QZM3 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.61■□□□□ 0.57
Clcf1Q9QZM3 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clcf1Q9QZM3 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clcf1Q9QZM3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Clcf1Q9QZM3 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Clcf1Q9QZM3 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.61■□□□□ 0.57
Clcf1Q9QZM3 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clcf1Q9QZM3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clcf1Q9QZM3 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clcf1Q9QZM3 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Clcf1Q9QZM3 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Clcf1Q9QZM3 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Clcf1Q9QZM3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Clcf1Q9QZM3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clcf1Q9QZM3 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clcf1Q9QZM3 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clcf1Q9QZM3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Clcf1Q9QZM3 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.6■□□□□ 0.57
Clcf1Q9QZM3 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Clcf1Q9QZM3 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.6■□□□□ 0.57
Clcf1Q9QZM3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Clcf1Q9QZM3 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Clcf1Q9QZM3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clcf1Q9QZM3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.6■□□□□ 0.57
Clcf1Q9QZM3 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clcf1Q9QZM3 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.6■□□□□ 0.57
Clcf1Q9QZM3 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Clcf1Q9QZM3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Clcf1Q9QZM3 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Clcf1Q9QZM3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clcf1Q9QZM3 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clcf1Q9QZM3 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Clcf1Q9QZM3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Clcf1Q9QZM3 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clcf1Q9QZM3 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clcf1Q9QZM3 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Clcf1Q9QZM3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Clcf1Q9QZM3 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Clcf1Q9QZM3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Clcf1Q9QZM3 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clcf1Q9QZM3 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clcf1Q9QZM3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clcf1Q9QZM3 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.57■□□□□ 0.56
Clcf1Q9QZM3 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clcf1Q9QZM3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clcf1Q9QZM3 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clcf1Q9QZM3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Clcf1Q9QZM3 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.56■□□□□ 0.56
Clcf1Q9QZM3 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clcf1Q9QZM3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clcf1Q9QZM3 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms