Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Shroom3Q9QXN0 Gm12922-201ENSMUST00000120626 809 ntBASIC20.84■□□□□ 0.93
Shroom3Q9QXN0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Shroom3Q9QXN0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Shroom3Q9QXN0 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.83■□□□□ 0.93
Shroom3Q9QXN0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Shroom3Q9QXN0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
Shroom3Q9QXN0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.83■□□□□ 0.93
Shroom3Q9QXN0 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Shroom3Q9QXN0 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.83■□□□□ 0.92
Shroom3Q9QXN0 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Shroom3Q9QXN0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Shroom3Q9QXN0 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Shroom3Q9QXN0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Shroom3Q9QXN0 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shroom3Q9QXN0 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shroom3Q9QXN0 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Shroom3Q9QXN0 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Shroom3Q9QXN0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shroom3Q9QXN0 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shroom3Q9QXN0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shroom3Q9QXN0 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Shroom3Q9QXN0 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Shroom3Q9QXN0 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.8■□□□□ 0.92
Shroom3Q9QXN0 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
Shroom3Q9QXN0 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Shroom3Q9QXN0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Shroom3Q9QXN0 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Shroom3Q9QXN0 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
Shroom3Q9QXN0 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shroom3Q9QXN0 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.79■□□□□ 0.92
Shroom3Q9QXN0 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shroom3Q9QXN0 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
Shroom3Q9QXN0 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shroom3Q9QXN0 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.78■□□□□ 0.92
Shroom3Q9QXN0 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shroom3Q9QXN0 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Shroom3Q9QXN0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shroom3Q9QXN0 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.78■□□□□ 0.92
Shroom3Q9QXN0 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shroom3Q9QXN0 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shroom3Q9QXN0 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shroom3Q9QXN0 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shroom3Q9QXN0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Shroom3Q9QXN0 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.77■□□□□ 0.92
Shroom3Q9QXN0 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Shroom3Q9QXN0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Shroom3Q9QXN0 Gm40881-201ENSMUST00000223397 166 ntBASIC20.77■□□□□ 0.92
Shroom3Q9QXN0 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Shroom3Q9QXN0 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Shroom3Q9QXN0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Shroom3Q9QXN0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Shroom3Q9QXN0 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shroom3Q9QXN0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Shroom3Q9QXN0 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Shroom3Q9QXN0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shroom3Q9QXN0 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shroom3Q9QXN0 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.76■□□□□ 0.91
Shroom3Q9QXN0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shroom3Q9QXN0 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.76■□□□□ 0.91
Shroom3Q9QXN0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Shroom3Q9QXN0 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shroom3Q9QXN0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Shroom3Q9QXN0 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Shroom3Q9QXN0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shroom3Q9QXN0 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shroom3Q9QXN0 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shroom3Q9QXN0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shroom3Q9QXN0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shroom3Q9QXN0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shroom3Q9QXN0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shroom3Q9QXN0 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shroom3Q9QXN0 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Shroom3Q9QXN0 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.74■□□□□ 0.91
Shroom3Q9QXN0 Serp2-204ENSMUST00000228055 705 ntBASIC20.74■□□□□ 0.91
Shroom3Q9QXN0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shroom3Q9QXN0 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.74■□□□□ 0.91
Shroom3Q9QXN0 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.74■□□□□ 0.91
Shroom3Q9QXN0 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Shroom3Q9QXN0 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shroom3Q9QXN0 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Shroom3Q9QXN0 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shroom3Q9QXN0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Shroom3Q9QXN0 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shroom3Q9QXN0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shroom3Q9QXN0 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Shroom3Q9QXN0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.73■□□□□ 0.91
Shroom3Q9QXN0 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shroom3Q9QXN0 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shroom3Q9QXN0 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shroom3Q9QXN0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Shroom3Q9QXN0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shroom3Q9QXN0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shroom3Q9QXN0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Shroom3Q9QXN0 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.72■□□□□ 0.91
Shroom3Q9QXN0 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shroom3Q9QXN0 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.72■□□□□ 0.91
Shroom3Q9QXN0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shroom3Q9QXN0 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.71■□□□□ 0.91
Shroom3Q9QXN0 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms