Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Scn5aQ9JJV9 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Scn5aQ9JJV9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Scn5aQ9JJV9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Scn5aQ9JJV9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.73■■□□□ 1.07
Scn5aQ9JJV9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Scn5aQ9JJV9 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Scn5aQ9JJV9 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.72■■□□□ 1.07
Scn5aQ9JJV9 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Scn5aQ9JJV9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Scn5aQ9JJV9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Scn5aQ9JJV9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Scn5aQ9JJV9 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Scn5aQ9JJV9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Scn5aQ9JJV9 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.72■■□□□ 1.07
Scn5aQ9JJV9 Spcs1-204ENSMUST00000226782 949 ntBASIC21.72■■□□□ 1.07
Scn5aQ9JJV9 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Scn5aQ9JJV9 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Scn5aQ9JJV9 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Scn5aQ9JJV9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.71■■□□□ 1.07
Scn5aQ9JJV9 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Scn5aQ9JJV9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Scn5aQ9JJV9 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.71■■□□□ 1.07
Scn5aQ9JJV9 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.71■■□□□ 1.07
Scn5aQ9JJV9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Scn5aQ9JJV9 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.7■■□□□ 1.06
Scn5aQ9JJV9 Gm43530-201ENSMUST00000195920 274 ntBASIC21.7■■□□□ 1.06
Scn5aQ9JJV9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Scn5aQ9JJV9 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Scn5aQ9JJV9 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.69■■□□□ 1.06
Scn5aQ9JJV9 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Scn5aQ9JJV9 Gm5874-201ENSMUST00000096101 508 ntBASIC21.69■■□□□ 1.06
Scn5aQ9JJV9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Scn5aQ9JJV9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Scn5aQ9JJV9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Scn5aQ9JJV9 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Scn5aQ9JJV9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Scn5aQ9JJV9 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Scn5aQ9JJV9 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Scn5aQ9JJV9 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Scn5aQ9JJV9 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Scn5aQ9JJV9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Scn5aQ9JJV9 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Scn5aQ9JJV9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Scn5aQ9JJV9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Scn5aQ9JJV9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Scn5aQ9JJV9 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Scn5aQ9JJV9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scn5aQ9JJV9 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scn5aQ9JJV9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scn5aQ9JJV9 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.65■■□□□ 1.06
Scn5aQ9JJV9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
Scn5aQ9JJV9 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.64■■□□□ 1.06
Scn5aQ9JJV9 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Scn5aQ9JJV9 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Scn5aQ9JJV9 Gm26833-201ENSMUST00000180899 440 ntBASIC21.64■■□□□ 1.05
Scn5aQ9JJV9 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Scn5aQ9JJV9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Scn5aQ9JJV9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Scn5aQ9JJV9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Scn5aQ9JJV9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Scn5aQ9JJV9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.63■■□□□ 1.05
Scn5aQ9JJV9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.63■■□□□ 1.05
Scn5aQ9JJV9 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.63■■□□□ 1.05
Scn5aQ9JJV9 Gm10493-201ENSMUST00000097270 612 ntBASIC21.63■■□□□ 1.05
Scn5aQ9JJV9 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scn5aQ9JJV9 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scn5aQ9JJV9 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scn5aQ9JJV9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.63■■□□□ 1.05
Scn5aQ9JJV9 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.63■■□□□ 1.05
Scn5aQ9JJV9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Scn5aQ9JJV9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Scn5aQ9JJV9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scn5aQ9JJV9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Scn5aQ9JJV9 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scn5aQ9JJV9 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scn5aQ9JJV9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scn5aQ9JJV9 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scn5aQ9JJV9 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Scn5aQ9JJV9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
Scn5aQ9JJV9 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.61■■□□□ 1.05
Scn5aQ9JJV9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Scn5aQ9JJV9 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Scn5aQ9JJV9 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scn5aQ9JJV9 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Scn5aQ9JJV9 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scn5aQ9JJV9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.6■■□□□ 1.05
Scn5aQ9JJV9 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Scn5aQ9JJV9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scn5aQ9JJV9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scn5aQ9JJV9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scn5aQ9JJV9 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Scn5aQ9JJV9 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scn5aQ9JJV9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Scn5aQ9JJV9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.6■■□□□ 1.05
Scn5aQ9JJV9 Gm40848-201ENSMUST00000221998 324 ntBASIC21.6■■□□□ 1.05
Scn5aQ9JJV9 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scn5aQ9JJV9 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scn5aQ9JJV9 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Scn5aQ9JJV9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms