Protein–RNA interactions for Protein: Q9JIG4

Ppp1r3f, Protein phosphatase 1 regulatory subunit 3F, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3fQ9JIG4 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Ppp1r3fQ9JIG4 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Ppp1r3fQ9JIG4 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Ppp1r3fQ9JIG4 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
Ppp1r3fQ9JIG4 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Ppp1r3fQ9JIG4 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC26.37■■□□□ 1.81
Ppp1r3fQ9JIG4 Gm40881-201ENSMUST00000223397 166 ntBASIC26.37■■□□□ 1.81
Ppp1r3fQ9JIG4 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
Ppp1r3fQ9JIG4 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Ppp1r3fQ9JIG4 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Ppp1r3fQ9JIG4 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC26.37■■□□□ 1.81
Ppp1r3fQ9JIG4 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
Ppp1r3fQ9JIG4 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Ppp1r3fQ9JIG4 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Ppp1r3fQ9JIG4 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Ppp1r3fQ9JIG4 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Ppp1r3fQ9JIG4 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Ppp1r3fQ9JIG4 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
Ppp1r3fQ9JIG4 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Ppp1r3fQ9JIG4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Ppp1r3fQ9JIG4 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Ppp1r3fQ9JIG4 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Ppp1r3fQ9JIG4 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Ppp1r3fQ9JIG4 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ppp1r3fQ9JIG4 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ppp1r3fQ9JIG4 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC26.35■■□□□ 1.81
Ppp1r3fQ9JIG4 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ppp1r3fQ9JIG4 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Ppp1r3fQ9JIG4 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
Ppp1r3fQ9JIG4 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Ppp1r3fQ9JIG4 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Ppp1r3fQ9JIG4 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
Ppp1r3fQ9JIG4 AC116713.1-201ENSMUST00000215074 430 ntBASIC26.34■■□□□ 1.81
Ppp1r3fQ9JIG4 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ppp1r3fQ9JIG4 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
Ppp1r3fQ9JIG4 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC26.33■■□□□ 1.81
Ppp1r3fQ9JIG4 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ppp1r3fQ9JIG4 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC26.33■■□□□ 1.81
Ppp1r3fQ9JIG4 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ppp1r3fQ9JIG4 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ppp1r3fQ9JIG4 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
Ppp1r3fQ9JIG4 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ppp1r3fQ9JIG4 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Ppp1r3fQ9JIG4 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ppp1r3fQ9JIG4 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ppp1r3fQ9JIG4 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC26.32■■□□□ 1.8
Ppp1r3fQ9JIG4 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC26.32■■□□□ 1.8
Ppp1r3fQ9JIG4 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC26.32■■□□□ 1.8
Ppp1r3fQ9JIG4 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Ppp1r3fQ9JIG4 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ppp1r3fQ9JIG4 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ppp1r3fQ9JIG4 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ppp1r3fQ9JIG4 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Ppp1r3fQ9JIG4 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC26.31■■□□□ 1.8
Ppp1r3fQ9JIG4 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ppp1r3fQ9JIG4 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ppp1r3fQ9JIG4 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ppp1r3fQ9JIG4 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ppp1r3fQ9JIG4 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ppp1r3fQ9JIG4 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
Ppp1r3fQ9JIG4 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ppp1r3fQ9JIG4 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC26.3■■□□□ 1.8
Ppp1r3fQ9JIG4 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ppp1r3fQ9JIG4 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ppp1r3fQ9JIG4 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ppp1r3fQ9JIG4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
Ppp1r3fQ9JIG4 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ppp1r3fQ9JIG4 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC26.29■■□□□ 1.8
Ppp1r3fQ9JIG4 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC26.29■■□□□ 1.8
Ppp1r3fQ9JIG4 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ppp1r3fQ9JIG4 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ppp1r3fQ9JIG4 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ppp1r3fQ9JIG4 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
Ppp1r3fQ9JIG4 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Ppp1r3fQ9JIG4 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ppp1r3fQ9JIG4 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Ppp1r3fQ9JIG4 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ppp1r3fQ9JIG4 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ppp1r3fQ9JIG4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ppp1r3fQ9JIG4 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ppp1r3fQ9JIG4 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Ppp1r3fQ9JIG4 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ppp1r3fQ9JIG4 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ppp1r3fQ9JIG4 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ppp1r3fQ9JIG4 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC26.27■■□□□ 1.8
Ppp1r3fQ9JIG4 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
Ppp1r3fQ9JIG4 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ppp1r3fQ9JIG4 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Ppp1r3fQ9JIG4 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Ppp1r3fQ9JIG4 Gm18284-201ENSMUST00000172604 624 ntBASIC26.26■■□□□ 1.79
Ppp1r3fQ9JIG4 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC26.26■■□□□ 1.79
Ppp1r3fQ9JIG4 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ppp1r3fQ9JIG4 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ppp1r3fQ9JIG4 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ppp1r3fQ9JIG4 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ppp1r3fQ9JIG4 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ppp1r3fQ9JIG4 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC26.26■■□□□ 1.79
Ppp1r3fQ9JIG4 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ppp1r3fQ9JIG4 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ppp1r3fQ9JIG4 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms