Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtp4Q9ER80 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtp4Q9ER80 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtp4Q9ER80 Gm10399-202ENSMUST00000202768 748 ntBASIC19.32■□□□□ 0.68
Rtp4Q9ER80 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtp4Q9ER80 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtp4Q9ER80 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtp4Q9ER80 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Rtp4Q9ER80 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rtp4Q9ER80 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.32■□□□□ 0.68
Rtp4Q9ER80 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtp4Q9ER80 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtp4Q9ER80 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtp4Q9ER80 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.31■□□□□ 0.68
Rtp4Q9ER80 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtp4Q9ER80 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rtp4Q9ER80 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rtp4Q9ER80 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rtp4Q9ER80 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.3■□□□□ 0.68
Rtp4Q9ER80 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rtp4Q9ER80 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtp4Q9ER80 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtp4Q9ER80 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Rtp4Q9ER80 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtp4Q9ER80 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtp4Q9ER80 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtp4Q9ER80 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Rtp4Q9ER80 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Rtp4Q9ER80 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtp4Q9ER80 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.28■□□□□ 0.68
Rtp4Q9ER80 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtp4Q9ER80 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rtp4Q9ER80 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.28■□□□□ 0.68
Rtp4Q9ER80 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtp4Q9ER80 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtp4Q9ER80 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtp4Q9ER80 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtp4Q9ER80 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtp4Q9ER80 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.27■□□□□ 0.68
Rtp4Q9ER80 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtp4Q9ER80 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtp4Q9ER80 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Rtp4Q9ER80 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtp4Q9ER80 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtp4Q9ER80 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtp4Q9ER80 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtp4Q9ER80 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtp4Q9ER80 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtp4Q9ER80 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtp4Q9ER80 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtp4Q9ER80 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtp4Q9ER80 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtp4Q9ER80 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtp4Q9ER80 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rtp4Q9ER80 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.25■□□□□ 0.67
Rtp4Q9ER80 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rtp4Q9ER80 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Rtp4Q9ER80 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtp4Q9ER80 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Rtp4Q9ER80 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Rtp4Q9ER80 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtp4Q9ER80 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Rtp4Q9ER80 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtp4Q9ER80 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtp4Q9ER80 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rtp4Q9ER80 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.23■□□□□ 0.67
Rtp4Q9ER80 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtp4Q9ER80 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rtp4Q9ER80 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtp4Q9ER80 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rtp4Q9ER80 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtp4Q9ER80 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Rtp4Q9ER80 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Rtp4Q9ER80 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.23■□□□□ 0.67
Rtp4Q9ER80 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtp4Q9ER80 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtp4Q9ER80 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.22■□□□□ 0.67
Rtp4Q9ER80 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtp4Q9ER80 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtp4Q9ER80 Gm9847-201ENSMUST00000052528 599 ntBASIC19.22■□□□□ 0.67
Rtp4Q9ER80 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rtp4Q9ER80 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.22■□□□□ 0.67
Rtp4Q9ER80 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rtp4Q9ER80 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rtp4Q9ER80 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rtp4Q9ER80 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rtp4Q9ER80 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.21■□□□□ 0.67
Rtp4Q9ER80 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rtp4Q9ER80 Gm13241-201ENSMUST00000094493 780 ntBASIC19.21■□□□□ 0.67
Rtp4Q9ER80 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rtp4Q9ER80 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rtp4Q9ER80 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rtp4Q9ER80 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Rtp4Q9ER80 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Rtp4Q9ER80 Gm21956-201ENSMUST00000179946 522 ntBASIC19.2■□□□□ 0.66
Rtp4Q9ER80 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rtp4Q9ER80 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rtp4Q9ER80 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rtp4Q9ER80 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rtp4Q9ER80 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms