Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
Upf1Q9EPU0 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC24.29■■□□□ 1.48
Upf1Q9EPU0 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Upf1Q9EPU0 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Upf1Q9EPU0 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC24.28■■□□□ 1.48
Upf1Q9EPU0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Upf1Q9EPU0 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.27■■□□□ 1.48
Upf1Q9EPU0 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Upf1Q9EPU0 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC24.27■■□□□ 1.48
Upf1Q9EPU0 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Upf1Q9EPU0 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC24.26■■□□□ 1.47
Upf1Q9EPU0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC24.26■■□□□ 1.47
Upf1Q9EPU0 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Upf1Q9EPU0 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Upf1Q9EPU0 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Upf1Q9EPU0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Upf1Q9EPU0 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC24.25■■□□□ 1.47
Upf1Q9EPU0 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC24.25■■□□□ 1.47
Upf1Q9EPU0 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
Upf1Q9EPU0 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Upf1Q9EPU0 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Upf1Q9EPU0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Upf1Q9EPU0 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Upf1Q9EPU0 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC24.24■■□□□ 1.47
Upf1Q9EPU0 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Upf1Q9EPU0 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Upf1Q9EPU0 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
Upf1Q9EPU0 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC24.24■■□□□ 1.47
Upf1Q9EPU0 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Upf1Q9EPU0 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Upf1Q9EPU0 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Upf1Q9EPU0 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Upf1Q9EPU0 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC24.23■■□□□ 1.47
Upf1Q9EPU0 Gm13836-201ENSMUST00000121159 501 ntBASIC24.22■■□□□ 1.47
Upf1Q9EPU0 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Upf1Q9EPU0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC24.22■■□□□ 1.47
Upf1Q9EPU0 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Upf1Q9EPU0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Upf1Q9EPU0 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC24.21■■□□□ 1.47
Upf1Q9EPU0 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Upf1Q9EPU0 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Upf1Q9EPU0 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Upf1Q9EPU0 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Upf1Q9EPU0 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
Upf1Q9EPU0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Upf1Q9EPU0 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.47
Upf1Q9EPU0 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Upf1Q9EPU0 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Upf1Q9EPU0 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC24.2■■□□□ 1.46
Upf1Q9EPU0 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Upf1Q9EPU0 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC24.2■■□□□ 1.46
Upf1Q9EPU0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Upf1Q9EPU0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Upf1Q9EPU0 Gm13168-201ENSMUST00000121771 632 ntBASIC24.19■■□□□ 1.46
Upf1Q9EPU0 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Upf1Q9EPU0 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Upf1Q9EPU0 Mir5133-201ENSMUST00000174955 77 ntBASIC24.18■■□□□ 1.46
Upf1Q9EPU0 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Upf1Q9EPU0 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
Upf1Q9EPU0 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
Upf1Q9EPU0 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC24.17■■□□□ 1.46
Upf1Q9EPU0 AC166356.1-201ENSMUST00000228236 1426 ntBASIC24.17■■□□□ 1.46
Upf1Q9EPU0 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC24.16■■□□□ 1.46
Upf1Q9EPU0 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Upf1Q9EPU0 Gm3807-201ENSMUST00000193520 1168 ntBASIC24.16■■□□□ 1.46
Upf1Q9EPU0 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Upf1Q9EPU0 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Upf1Q9EPU0 Gm10812-201ENSMUST00000099864 546 ntBASIC24.16■■□□□ 1.46
Upf1Q9EPU0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
Upf1Q9EPU0 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
Upf1Q9EPU0 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Upf1Q9EPU0 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Upf1Q9EPU0 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
Upf1Q9EPU0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Upf1Q9EPU0 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
Upf1Q9EPU0 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC24.15■■□□□ 1.46
Upf1Q9EPU0 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Upf1Q9EPU0 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Upf1Q9EPU0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Upf1Q9EPU0 AC165080.2-201ENSMUST00000217491 1530 ntBASIC24.15■■□□□ 1.46
Upf1Q9EPU0 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Upf1Q9EPU0 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC24.14■■□□□ 1.46
Upf1Q9EPU0 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
Upf1Q9EPU0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC24.14■■□□□ 1.45
Upf1Q9EPU0 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Upf1Q9EPU0 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Upf1Q9EPU0 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC24.13■■□□□ 1.45
Upf1Q9EPU0 Gm29241-201ENSMUST00000189260 1096 ntBASIC24.13■■□□□ 1.45
Upf1Q9EPU0 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Upf1Q9EPU0 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC24.13■■□□□ 1.45
Upf1Q9EPU0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC24.12■■□□□ 1.45
Upf1Q9EPU0 Gm9988-201ENSMUST00000069786 435 ntBASIC24.12■■□□□ 1.45
Upf1Q9EPU0 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC24.12■■□□□ 1.45
Upf1Q9EPU0 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Upf1Q9EPU0 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Upf1Q9EPU0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Upf1Q9EPU0 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
Upf1Q9EPU0 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Upf1Q9EPU0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
Upf1Q9EPU0 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC24.11■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms