Protein–RNA interactions for Protein: Q9D7U6

Cldn22, Claudin-22, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn22Q9D7U6 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn22Q9D7U6 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn22Q9D7U6 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn22Q9D7U6 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.74■□□□□ 0.91
Cldn22Q9D7U6 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cldn22Q9D7U6 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cldn22Q9D7U6 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cldn22Q9D7U6 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cldn22Q9D7U6 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Cldn22Q9D7U6 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.74■□□□□ 0.91
Cldn22Q9D7U6 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cldn22Q9D7U6 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cldn22Q9D7U6 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cldn22Q9D7U6 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cldn22Q9D7U6 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cldn22Q9D7U6 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cldn22Q9D7U6 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.73■□□□□ 0.91
Cldn22Q9D7U6 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Cldn22Q9D7U6 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.73■□□□□ 0.91
Cldn22Q9D7U6 Gm7417-201ENSMUST00000192950 473 ntBASIC20.73■□□□□ 0.91
Cldn22Q9D7U6 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.73■□□□□ 0.91
Cldn22Q9D7U6 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cldn22Q9D7U6 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cldn22Q9D7U6 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cldn22Q9D7U6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cldn22Q9D7U6 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cldn22Q9D7U6 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cldn22Q9D7U6 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cldn22Q9D7U6 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.72■□□□□ 0.91
Cldn22Q9D7U6 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.72■□□□□ 0.91
Cldn22Q9D7U6 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.72■□□□□ 0.91
Cldn22Q9D7U6 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Cldn22Q9D7U6 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Cldn22Q9D7U6 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cldn22Q9D7U6 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cldn22Q9D7U6 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.71■□□□□ 0.91
Cldn22Q9D7U6 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.71■□□□□ 0.91
Cldn22Q9D7U6 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cldn22Q9D7U6 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Cldn22Q9D7U6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cldn22Q9D7U6 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.7■□□□□ 0.9
Cldn22Q9D7U6 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.7■□□□□ 0.9
Cldn22Q9D7U6 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cldn22Q9D7U6 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.7■□□□□ 0.9
Cldn22Q9D7U6 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cldn22Q9D7U6 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn22Q9D7U6 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Cldn22Q9D7U6 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn22Q9D7U6 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn22Q9D7U6 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn22Q9D7U6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn22Q9D7U6 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Cldn22Q9D7U6 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn22Q9D7U6 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn22Q9D7U6 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn22Q9D7U6 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn22Q9D7U6 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.68■□□□□ 0.9
Cldn22Q9D7U6 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Cldn22Q9D7U6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Cldn22Q9D7U6 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn22Q9D7U6 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn22Q9D7U6 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn22Q9D7U6 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn22Q9D7U6 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.67■□□□□ 0.9
Cldn22Q9D7U6 Gm40881-201ENSMUST00000223397 166 ntBASIC20.67■□□□□ 0.9
Cldn22Q9D7U6 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn22Q9D7U6 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.67■□□□□ 0.9
Cldn22Q9D7U6 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn22Q9D7U6 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn22Q9D7U6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn22Q9D7U6 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Cldn22Q9D7U6 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.67■□□□□ 0.9
Cldn22Q9D7U6 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn22Q9D7U6 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn22Q9D7U6 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Cldn22Q9D7U6 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn22Q9D7U6 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn22Q9D7U6 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.66■□□□□ 0.9
Cldn22Q9D7U6 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn22Q9D7U6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Cldn22Q9D7U6 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.65■□□□□ 0.9
Cldn22Q9D7U6 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cldn22Q9D7U6 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Cldn22Q9D7U6 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cldn22Q9D7U6 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cldn22Q9D7U6 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cldn22Q9D7U6 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cldn22Q9D7U6 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cldn22Q9D7U6 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.64■□□□□ 0.89
Cldn22Q9D7U6 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cldn22Q9D7U6 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cldn22Q9D7U6 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cldn22Q9D7U6 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cldn22Q9D7U6 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn22Q9D7U6 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn22Q9D7U6 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn22Q9D7U6 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cldn22Q9D7U6 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cldn22Q9D7U6 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cldn22Q9D7U6 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms