Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Tmem54Q9D7S1 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Tmem54Q9D7S1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tmem54Q9D7S1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tmem54Q9D7S1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tmem54Q9D7S1 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Tmem54Q9D7S1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tmem54Q9D7S1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tmem54Q9D7S1 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tmem54Q9D7S1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tmem54Q9D7S1 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tmem54Q9D7S1 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tmem54Q9D7S1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Tmem54Q9D7S1 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.13■□□□□ 0.49
Tmem54Q9D7S1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tmem54Q9D7S1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.13■□□□□ 0.49
Tmem54Q9D7S1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.13■□□□□ 0.49
Tmem54Q9D7S1 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tmem54Q9D7S1 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tmem54Q9D7S1 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.13■□□□□ 0.49
Tmem54Q9D7S1 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Tmem54Q9D7S1 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
Tmem54Q9D7S1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Tmem54Q9D7S1 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.12■□□□□ 0.49
Tmem54Q9D7S1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tmem54Q9D7S1 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tmem54Q9D7S1 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tmem54Q9D7S1 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
Tmem54Q9D7S1 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tmem54Q9D7S1 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Tmem54Q9D7S1 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tmem54Q9D7S1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tmem54Q9D7S1 Gm22238-201ENSMUST00000175222 88 ntBASIC18.11■□□□□ 0.49
Tmem54Q9D7S1 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Tmem54Q9D7S1 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Tmem54Q9D7S1 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tmem54Q9D7S1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.11■□□□□ 0.49
Tmem54Q9D7S1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tmem54Q9D7S1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tmem54Q9D7S1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tmem54Q9D7S1 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tmem54Q9D7S1 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tmem54Q9D7S1 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tmem54Q9D7S1 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Tmem54Q9D7S1 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Tmem54Q9D7S1 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tmem54Q9D7S1 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tmem54Q9D7S1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tmem54Q9D7S1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.1■□□□□ 0.49
Tmem54Q9D7S1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tmem54Q9D7S1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.1■□□□□ 0.49
Tmem54Q9D7S1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Tmem54Q9D7S1 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmem54Q9D7S1 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tmem54Q9D7S1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.09■□□□□ 0.49
Tmem54Q9D7S1 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.09■□□□□ 0.49
Tmem54Q9D7S1 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmem54Q9D7S1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tmem54Q9D7S1 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Tmem54Q9D7S1 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Tmem54Q9D7S1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Tmem54Q9D7S1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Tmem54Q9D7S1 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Tmem54Q9D7S1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Tmem54Q9D7S1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tmem54Q9D7S1 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Tmem54Q9D7S1 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tmem54Q9D7S1 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tmem54Q9D7S1 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.07■□□□□ 0.48
Tmem54Q9D7S1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tmem54Q9D7S1 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tmem54Q9D7S1 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tmem54Q9D7S1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Tmem54Q9D7S1 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.07■□□□□ 0.48
Tmem54Q9D7S1 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Tmem54Q9D7S1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Tmem54Q9D7S1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tmem54Q9D7S1 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Tmem54Q9D7S1 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tmem54Q9D7S1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tmem54Q9D7S1 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tmem54Q9D7S1 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Tmem54Q9D7S1 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.06■□□□□ 0.48
Tmem54Q9D7S1 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tmem54Q9D7S1 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tmem54Q9D7S1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tmem54Q9D7S1 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tmem54Q9D7S1 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tmem54Q9D7S1 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tmem54Q9D7S1 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tmem54Q9D7S1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.05■□□□□ 0.48
Tmem54Q9D7S1 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.05■□□□□ 0.48
Tmem54Q9D7S1 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tmem54Q9D7S1 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tmem54Q9D7S1 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Tmem54Q9D7S1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tmem54Q9D7S1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Tmem54Q9D7S1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.04■□□□□ 0.48
Tmem54Q9D7S1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Tmem54Q9D7S1 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms