Protein–RNA interactions for Protein: Q9D3I0

5530400C23Rik, RIKEN cDNA 5530400C23 gene, mousemouse

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530400C23RikQ9D3I0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
5530400C23RikQ9D3I0 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
5530400C23RikQ9D3I0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
5530400C23RikQ9D3I0 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
5530400C23RikQ9D3I0 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
5530400C23RikQ9D3I0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
5530400C23RikQ9D3I0 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
5530400C23RikQ9D3I0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
5530400C23RikQ9D3I0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
5530400C23RikQ9D3I0 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
5530400C23RikQ9D3I0 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.27■□□□□ 0.84
5530400C23RikQ9D3I0 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
5530400C23RikQ9D3I0 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
5530400C23RikQ9D3I0 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.27■□□□□ 0.84
5530400C23RikQ9D3I0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.27■□□□□ 0.84
5530400C23RikQ9D3I0 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
5530400C23RikQ9D3I0 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
5530400C23RikQ9D3I0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
5530400C23RikQ9D3I0 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
5530400C23RikQ9D3I0 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.26■□□□□ 0.83
5530400C23RikQ9D3I0 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
5530400C23RikQ9D3I0 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
5530400C23RikQ9D3I0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
5530400C23RikQ9D3I0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
5530400C23RikQ9D3I0 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
5530400C23RikQ9D3I0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
5530400C23RikQ9D3I0 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.25■□□□□ 0.83
5530400C23RikQ9D3I0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
5530400C23RikQ9D3I0 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
5530400C23RikQ9D3I0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
5530400C23RikQ9D3I0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
5530400C23RikQ9D3I0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
5530400C23RikQ9D3I0 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
5530400C23RikQ9D3I0 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.24■□□□□ 0.83
5530400C23RikQ9D3I0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
5530400C23RikQ9D3I0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
5530400C23RikQ9D3I0 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
5530400C23RikQ9D3I0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.24■□□□□ 0.83
5530400C23RikQ9D3I0 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
5530400C23RikQ9D3I0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
5530400C23RikQ9D3I0 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
5530400C23RikQ9D3I0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
5530400C23RikQ9D3I0 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
5530400C23RikQ9D3I0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
5530400C23RikQ9D3I0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
5530400C23RikQ9D3I0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
5530400C23RikQ9D3I0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
5530400C23RikQ9D3I0 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
5530400C23RikQ9D3I0 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.23■□□□□ 0.83
5530400C23RikQ9D3I0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
5530400C23RikQ9D3I0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
5530400C23RikQ9D3I0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
5530400C23RikQ9D3I0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.22■□□□□ 0.83
5530400C23RikQ9D3I0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.22■□□□□ 0.83
5530400C23RikQ9D3I0 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
5530400C23RikQ9D3I0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
5530400C23RikQ9D3I0 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.22■□□□□ 0.83
5530400C23RikQ9D3I0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
5530400C23RikQ9D3I0 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.22■□□□□ 0.83
5530400C23RikQ9D3I0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
5530400C23RikQ9D3I0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
5530400C23RikQ9D3I0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
5530400C23RikQ9D3I0 Gm40881-201ENSMUST00000223397 166 ntBASIC20.21■□□□□ 0.83
5530400C23RikQ9D3I0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
5530400C23RikQ9D3I0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
5530400C23RikQ9D3I0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
5530400C23RikQ9D3I0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
5530400C23RikQ9D3I0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
5530400C23RikQ9D3I0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
5530400C23RikQ9D3I0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
5530400C23RikQ9D3I0 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
5530400C23RikQ9D3I0 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
5530400C23RikQ9D3I0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
5530400C23RikQ9D3I0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
5530400C23RikQ9D3I0 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
5530400C23RikQ9D3I0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
5530400C23RikQ9D3I0 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
5530400C23RikQ9D3I0 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
5530400C23RikQ9D3I0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
5530400C23RikQ9D3I0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
5530400C23RikQ9D3I0 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.19■□□□□ 0.82
5530400C23RikQ9D3I0 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
5530400C23RikQ9D3I0 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
5530400C23RikQ9D3I0 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.19■□□□□ 0.82
5530400C23RikQ9D3I0 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
5530400C23RikQ9D3I0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
5530400C23RikQ9D3I0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
5530400C23RikQ9D3I0 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
5530400C23RikQ9D3I0 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
5530400C23RikQ9D3I0 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.18■□□□□ 0.82
5530400C23RikQ9D3I0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
5530400C23RikQ9D3I0 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
5530400C23RikQ9D3I0 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.18■□□□□ 0.82
5530400C23RikQ9D3I0 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
5530400C23RikQ9D3I0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.18■□□□□ 0.82
5530400C23RikQ9D3I0 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
5530400C23RikQ9D3I0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
5530400C23RikQ9D3I0 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
5530400C23RikQ9D3I0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
5530400C23RikQ9D3I0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms