Protein–RNA interactions for Protein: Q9D3I0

5530400C23Rik, RIKEN cDNA 5530400C23 gene, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530400C23RikQ9D3I0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
5530400C23RikQ9D3I0 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
5530400C23RikQ9D3I0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
5530400C23RikQ9D3I0 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
5530400C23RikQ9D3I0 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
5530400C23RikQ9D3I0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
5530400C23RikQ9D3I0 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
5530400C23RikQ9D3I0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
5530400C23RikQ9D3I0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
5530400C23RikQ9D3I0 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
5530400C23RikQ9D3I0 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.27■□□□□ 0.84
5530400C23RikQ9D3I0 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
5530400C23RikQ9D3I0 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
5530400C23RikQ9D3I0 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.27■□□□□ 0.84
5530400C23RikQ9D3I0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.27■□□□□ 0.84
5530400C23RikQ9D3I0 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
5530400C23RikQ9D3I0 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
5530400C23RikQ9D3I0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
5530400C23RikQ9D3I0 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
5530400C23RikQ9D3I0 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.26■□□□□ 0.83
5530400C23RikQ9D3I0 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
5530400C23RikQ9D3I0 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
5530400C23RikQ9D3I0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
5530400C23RikQ9D3I0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
5530400C23RikQ9D3I0 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
5530400C23RikQ9D3I0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
5530400C23RikQ9D3I0 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.25■□□□□ 0.83
5530400C23RikQ9D3I0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
5530400C23RikQ9D3I0 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
5530400C23RikQ9D3I0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
5530400C23RikQ9D3I0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
5530400C23RikQ9D3I0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
5530400C23RikQ9D3I0 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
5530400C23RikQ9D3I0 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.24■□□□□ 0.83
5530400C23RikQ9D3I0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
5530400C23RikQ9D3I0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
5530400C23RikQ9D3I0 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
5530400C23RikQ9D3I0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.24■□□□□ 0.83
5530400C23RikQ9D3I0 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
5530400C23RikQ9D3I0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
5530400C23RikQ9D3I0 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
5530400C23RikQ9D3I0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
5530400C23RikQ9D3I0 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
5530400C23RikQ9D3I0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
5530400C23RikQ9D3I0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
5530400C23RikQ9D3I0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
5530400C23RikQ9D3I0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
5530400C23RikQ9D3I0 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
5530400C23RikQ9D3I0 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.23■□□□□ 0.83
5530400C23RikQ9D3I0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
5530400C23RikQ9D3I0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
5530400C23RikQ9D3I0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
5530400C23RikQ9D3I0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.22■□□□□ 0.83
5530400C23RikQ9D3I0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.22■□□□□ 0.83
5530400C23RikQ9D3I0 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
5530400C23RikQ9D3I0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
5530400C23RikQ9D3I0 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.22■□□□□ 0.83
5530400C23RikQ9D3I0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
5530400C23RikQ9D3I0 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.22■□□□□ 0.83
5530400C23RikQ9D3I0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
5530400C23RikQ9D3I0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
5530400C23RikQ9D3I0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
5530400C23RikQ9D3I0 Gm40881-201ENSMUST00000223397 166 ntBASIC20.21■□□□□ 0.83
5530400C23RikQ9D3I0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
5530400C23RikQ9D3I0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
5530400C23RikQ9D3I0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
5530400C23RikQ9D3I0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
5530400C23RikQ9D3I0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
5530400C23RikQ9D3I0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
5530400C23RikQ9D3I0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
5530400C23RikQ9D3I0 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
5530400C23RikQ9D3I0 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
5530400C23RikQ9D3I0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
5530400C23RikQ9D3I0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
5530400C23RikQ9D3I0 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
5530400C23RikQ9D3I0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
5530400C23RikQ9D3I0 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
5530400C23RikQ9D3I0 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
5530400C23RikQ9D3I0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
5530400C23RikQ9D3I0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
5530400C23RikQ9D3I0 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.19■□□□□ 0.82
5530400C23RikQ9D3I0 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
5530400C23RikQ9D3I0 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
5530400C23RikQ9D3I0 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.19■□□□□ 0.82
5530400C23RikQ9D3I0 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
5530400C23RikQ9D3I0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
5530400C23RikQ9D3I0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
5530400C23RikQ9D3I0 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
5530400C23RikQ9D3I0 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
5530400C23RikQ9D3I0 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.18■□□□□ 0.82
5530400C23RikQ9D3I0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
5530400C23RikQ9D3I0 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
5530400C23RikQ9D3I0 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.18■□□□□ 0.82
5530400C23RikQ9D3I0 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
5530400C23RikQ9D3I0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.18■□□□□ 0.82
5530400C23RikQ9D3I0 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
5530400C23RikQ9D3I0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
5530400C23RikQ9D3I0 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
5530400C23RikQ9D3I0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
5530400C23RikQ9D3I0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 113.8 ms