Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Gm6821-201ENSMUST00000107540 542 ntBASIC21.94■■□□□ 1.1
Vps33aQ9D2N9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Vps33aQ9D2N9 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Vps33aQ9D2N9 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Vps33aQ9D2N9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Vps33aQ9D2N9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Vps33aQ9D2N9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Vps33aQ9D2N9 Gm9812-201ENSMUST00000061934 968 ntBASIC21.93■■□□□ 1.1
Vps33aQ9D2N9 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Vps33aQ9D2N9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Vps33aQ9D2N9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Vps33aQ9D2N9 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Vps33aQ9D2N9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Vps33aQ9D2N9 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vps33aQ9D2N9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vps33aQ9D2N9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vps33aQ9D2N9 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vps33aQ9D2N9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21.91■■□□□ 1.1
Vps33aQ9D2N9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
Vps33aQ9D2N9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vps33aQ9D2N9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vps33aQ9D2N9 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vps33aQ9D2N9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vps33aQ9D2N9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.91■■□□□ 1.1
Vps33aQ9D2N9 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Vps33aQ9D2N9 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Vps33aQ9D2N9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Vps33aQ9D2N9 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Vps33aQ9D2N9 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Vps33aQ9D2N9 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Vps33aQ9D2N9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Vps33aQ9D2N9 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Vps33aQ9D2N9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Vps33aQ9D2N9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
Vps33aQ9D2N9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Vps33aQ9D2N9 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Vps33aQ9D2N9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Vps33aQ9D2N9 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Vps33aQ9D2N9 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Vps33aQ9D2N9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
Vps33aQ9D2N9 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Vps33aQ9D2N9 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.88■■□□□ 1.09
Vps33aQ9D2N9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vps33aQ9D2N9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vps33aQ9D2N9 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.87■■□□□ 1.09
Vps33aQ9D2N9 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vps33aQ9D2N9 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vps33aQ9D2N9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vps33aQ9D2N9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Vps33aQ9D2N9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vps33aQ9D2N9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Vps33aQ9D2N9 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Vps33aQ9D2N9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Vps33aQ9D2N9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Vps33aQ9D2N9 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Vps33aQ9D2N9 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Vps33aQ9D2N9 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.85■■□□□ 1.09
Vps33aQ9D2N9 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.85■■□□□ 1.09
Vps33aQ9D2N9 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Vps33aQ9D2N9 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Vps33aQ9D2N9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Vps33aQ9D2N9 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vps33aQ9D2N9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vps33aQ9D2N9 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vps33aQ9D2N9 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
Vps33aQ9D2N9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vps33aQ9D2N9 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Vps33aQ9D2N9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vps33aQ9D2N9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vps33aQ9D2N9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Vps33aQ9D2N9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Vps33aQ9D2N9 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Vps33aQ9D2N9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Vps33aQ9D2N9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Vps33aQ9D2N9 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Vps33aQ9D2N9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.83■■□□□ 1.09
Vps33aQ9D2N9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Vps33aQ9D2N9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Vps33aQ9D2N9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vps33aQ9D2N9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Vps33aQ9D2N9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vps33aQ9D2N9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vps33aQ9D2N9 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Vps33aQ9D2N9 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.82■■□□□ 1.08
Vps33aQ9D2N9 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vps33aQ9D2N9 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vps33aQ9D2N9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vps33aQ9D2N9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vps33aQ9D2N9 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Vps33aQ9D2N9 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Vps33aQ9D2N9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Vps33aQ9D2N9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Vps33aQ9D2N9 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Vps33aQ9D2N9 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Vps33aQ9D2N9 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Vps33aQ9D2N9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
Vps33aQ9D2N9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Vps33aQ9D2N9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.81■■□□□ 1.08
Vps33aQ9D2N9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Vps33aQ9D2N9 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms