Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.5■□□□□ 0.87
Trim42Q9D2H5 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim42Q9D2H5 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim42Q9D2H5 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Trim42Q9D2H5 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim42Q9D2H5 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim42Q9D2H5 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim42Q9D2H5 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim42Q9D2H5 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim42Q9D2H5 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.5■□□□□ 0.87
Trim42Q9D2H5 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim42Q9D2H5 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Trim42Q9D2H5 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Trim42Q9D2H5 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Trim42Q9D2H5 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trim42Q9D2H5 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim42Q9D2H5 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim42Q9D2H5 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim42Q9D2H5 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim42Q9D2H5 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim42Q9D2H5 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trim42Q9D2H5 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim42Q9D2H5 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim42Q9D2H5 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim42Q9D2H5 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim42Q9D2H5 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim42Q9D2H5 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.47■□□□□ 0.87
Trim42Q9D2H5 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Trim42Q9D2H5 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.47■□□□□ 0.87
Trim42Q9D2H5 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim42Q9D2H5 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim42Q9D2H5 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Trim42Q9D2H5 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim42Q9D2H5 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Trim42Q9D2H5 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim42Q9D2H5 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
Trim42Q9D2H5 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.46■□□□□ 0.87
Trim42Q9D2H5 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Trim42Q9D2H5 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim42Q9D2H5 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim42Q9D2H5 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trim42Q9D2H5 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Trim42Q9D2H5 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.87
Trim42Q9D2H5 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trim42Q9D2H5 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim42Q9D2H5 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim42Q9D2H5 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Trim42Q9D2H5 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim42Q9D2H5 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Trim42Q9D2H5 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim42Q9D2H5 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Trim42Q9D2H5 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim42Q9D2H5 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Trim42Q9D2H5 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Trim42Q9D2H5 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.44■□□□□ 0.86
Trim42Q9D2H5 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.44■□□□□ 0.86
Trim42Q9D2H5 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim42Q9D2H5 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.44■□□□□ 0.86
Trim42Q9D2H5 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim42Q9D2H5 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim42Q9D2H5 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.43■□□□□ 0.86
Trim42Q9D2H5 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.43■□□□□ 0.86
Trim42Q9D2H5 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.43■□□□□ 0.86
Trim42Q9D2H5 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim42Q9D2H5 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim42Q9D2H5 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim42Q9D2H5 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trim42Q9D2H5 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim42Q9D2H5 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim42Q9D2H5 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trim42Q9D2H5 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim42Q9D2H5 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Trim42Q9D2H5 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim42Q9D2H5 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim42Q9D2H5 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim42Q9D2H5 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Trim42Q9D2H5 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim42Q9D2H5 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.41■□□□□ 0.86
Trim42Q9D2H5 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim42Q9D2H5 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Trim42Q9D2H5 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim42Q9D2H5 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trim42Q9D2H5 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim42Q9D2H5 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trim42Q9D2H5 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim42Q9D2H5 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim42Q9D2H5 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim42Q9D2H5 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Trim42Q9D2H5 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim42Q9D2H5 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim42Q9D2H5 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim42Q9D2H5 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trim42Q9D2H5 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim42Q9D2H5 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trim42Q9D2H5 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim42Q9D2H5 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim42Q9D2H5 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim42Q9D2H5 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim42Q9D2H5 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim42Q9D2H5 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms