Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Upk1aQ9D132 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Upk1aQ9D132 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Upk1aQ9D132 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Upk1aQ9D132 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Upk1aQ9D132 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Upk1aQ9D132 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Upk1aQ9D132 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Upk1aQ9D132 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Upk1aQ9D132 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Upk1aQ9D132 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.66■□□□□ 0.74
Upk1aQ9D132 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Upk1aQ9D132 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Upk1aQ9D132 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.66■□□□□ 0.74
Upk1aQ9D132 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Upk1aQ9D132 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.66■□□□□ 0.74
Upk1aQ9D132 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Upk1aQ9D132 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Upk1aQ9D132 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Upk1aQ9D132 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Upk1aQ9D132 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Upk1aQ9D132 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Upk1aQ9D132 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Upk1aQ9D132 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Upk1aQ9D132 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.65■□□□□ 0.74
Upk1aQ9D132 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Upk1aQ9D132 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Upk1aQ9D132 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Upk1aQ9D132 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Upk1aQ9D132 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Upk1aQ9D132 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.64■□□□□ 0.73
Upk1aQ9D132 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Upk1aQ9D132 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Upk1aQ9D132 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Upk1aQ9D132 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Upk1aQ9D132 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Upk1aQ9D132 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Upk1aQ9D132 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Upk1aQ9D132 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Upk1aQ9D132 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Upk1aQ9D132 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Upk1aQ9D132 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.63■□□□□ 0.73
Upk1aQ9D132 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Upk1aQ9D132 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Upk1aQ9D132 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Upk1aQ9D132 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Upk1aQ9D132 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Upk1aQ9D132 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.63■□□□□ 0.73
Upk1aQ9D132 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Upk1aQ9D132 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Upk1aQ9D132 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Upk1aQ9D132 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.62■□□□□ 0.73
Upk1aQ9D132 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Upk1aQ9D132 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Upk1aQ9D132 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Upk1aQ9D132 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Upk1aQ9D132 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Upk1aQ9D132 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.62■□□□□ 0.73
Upk1aQ9D132 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Upk1aQ9D132 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Upk1aQ9D132 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.61■□□□□ 0.73
Upk1aQ9D132 Gm11175-201ENSMUST00000116172 543 ntBASIC19.61■□□□□ 0.73
Upk1aQ9D132 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Upk1aQ9D132 Gm27502-201ENSMUST00000183495 199 ntBASIC19.61■□□□□ 0.73
Upk1aQ9D132 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Upk1aQ9D132 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Upk1aQ9D132 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Upk1aQ9D132 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Upk1aQ9D132 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Upk1aQ9D132 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Upk1aQ9D132 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Upk1aQ9D132 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.6■□□□□ 0.73
Upk1aQ9D132 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Upk1aQ9D132 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.6■□□□□ 0.73
Upk1aQ9D132 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Upk1aQ9D132 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
Upk1aQ9D132 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Upk1aQ9D132 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Upk1aQ9D132 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Upk1aQ9D132 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Upk1aQ9D132 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
Upk1aQ9D132 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Upk1aQ9D132 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Upk1aQ9D132 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.58■□□□□ 0.73
Upk1aQ9D132 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Upk1aQ9D132 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Upk1aQ9D132 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Upk1aQ9D132 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Upk1aQ9D132 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Upk1aQ9D132 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Upk1aQ9D132 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Upk1aQ9D132 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.57■□□□□ 0.72
Upk1aQ9D132 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Upk1aQ9D132 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Upk1aQ9D132 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Upk1aQ9D132 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Upk1aQ9D132 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.57■□□□□ 0.72
Upk1aQ9D132 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Upk1aQ9D132 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Upk1aQ9D132 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms