Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Raet1eQ9CZQ6 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Raet1eQ9CZQ6 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Raet1eQ9CZQ6 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Raet1eQ9CZQ6 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Raet1eQ9CZQ6 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Raet1eQ9CZQ6 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Raet1eQ9CZQ6 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Raet1eQ9CZQ6 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Raet1eQ9CZQ6 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Raet1eQ9CZQ6 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Raet1eQ9CZQ6 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Raet1eQ9CZQ6 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Raet1eQ9CZQ6 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Raet1eQ9CZQ6 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Raet1eQ9CZQ6 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Raet1eQ9CZQ6 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Raet1eQ9CZQ6 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Raet1eQ9CZQ6 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.17■□□□□ 0.5
Raet1eQ9CZQ6 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Raet1eQ9CZQ6 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Raet1eQ9CZQ6 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.17■□□□□ 0.5
Raet1eQ9CZQ6 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Raet1eQ9CZQ6 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Raet1eQ9CZQ6 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Raet1eQ9CZQ6 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Raet1eQ9CZQ6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.17■□□□□ 0.5
Raet1eQ9CZQ6 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.17■□□□□ 0.5
Raet1eQ9CZQ6 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Raet1eQ9CZQ6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Raet1eQ9CZQ6 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Raet1eQ9CZQ6 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Raet1eQ9CZQ6 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Raet1eQ9CZQ6 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Raet1eQ9CZQ6 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.16■□□□□ 0.5
Raet1eQ9CZQ6 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.16■□□□□ 0.5
Raet1eQ9CZQ6 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Raet1eQ9CZQ6 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Raet1eQ9CZQ6 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Raet1eQ9CZQ6 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Raet1eQ9CZQ6 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Raet1eQ9CZQ6 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.15■□□□□ 0.5
Raet1eQ9CZQ6 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Raet1eQ9CZQ6 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Raet1eQ9CZQ6 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Raet1eQ9CZQ6 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Raet1eQ9CZQ6 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Raet1eQ9CZQ6 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Raet1eQ9CZQ6 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Raet1eQ9CZQ6 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.14■□□□□ 0.5
Raet1eQ9CZQ6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Raet1eQ9CZQ6 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.14■□□□□ 0.49
Raet1eQ9CZQ6 Gm8503-201ENSMUST00000118131 455 ntBASIC18.14■□□□□ 0.49
Raet1eQ9CZQ6 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.14■□□□□ 0.49
Raet1eQ9CZQ6 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.14■□□□□ 0.49
Raet1eQ9CZQ6 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Raet1eQ9CZQ6 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Raet1eQ9CZQ6 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Raet1eQ9CZQ6 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Raet1eQ9CZQ6 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.13■□□□□ 0.49
Raet1eQ9CZQ6 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Raet1eQ9CZQ6 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Raet1eQ9CZQ6 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.13■□□□□ 0.49
Raet1eQ9CZQ6 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Raet1eQ9CZQ6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.13■□□□□ 0.49
Raet1eQ9CZQ6 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Raet1eQ9CZQ6 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.13■□□□□ 0.49
Raet1eQ9CZQ6 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Raet1eQ9CZQ6 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Raet1eQ9CZQ6 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Raet1eQ9CZQ6 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Raet1eQ9CZQ6 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Raet1eQ9CZQ6 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Raet1eQ9CZQ6 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.12■□□□□ 0.49
Raet1eQ9CZQ6 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Raet1eQ9CZQ6 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Raet1eQ9CZQ6 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Raet1eQ9CZQ6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Raet1eQ9CZQ6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Raet1eQ9CZQ6 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.12■□□□□ 0.49
Raet1eQ9CZQ6 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Raet1eQ9CZQ6 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Raet1eQ9CZQ6 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Raet1eQ9CZQ6 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.12■□□□□ 0.49
Raet1eQ9CZQ6 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Raet1eQ9CZQ6 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Raet1eQ9CZQ6 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Raet1eQ9CZQ6 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Raet1eQ9CZQ6 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Raet1eQ9CZQ6 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Raet1eQ9CZQ6 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Raet1eQ9CZQ6 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Raet1eQ9CZQ6 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Raet1eQ9CZQ6 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Raet1eQ9CZQ6 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Raet1eQ9CZQ6 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Raet1eQ9CZQ6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Raet1eQ9CZQ6 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.1■□□□□ 0.49
Raet1eQ9CZQ6 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Raet1eQ9CZQ6 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms