Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim13Q9CYB0 Scarna2-201ENSMUST00000157560 414 ntBASIC18.97■□□□□ 0.63
Trim13Q9CYB0 Gm9806-201ENSMUST00000051080 552 ntBASIC18.97■□□□□ 0.63
Trim13Q9CYB0 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim13Q9CYB0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.97■□□□□ 0.63
Trim13Q9CYB0 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim13Q9CYB0 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Trim13Q9CYB0 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim13Q9CYB0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.97■□□□□ 0.63
Trim13Q9CYB0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim13Q9CYB0 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim13Q9CYB0 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim13Q9CYB0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.96■□□□□ 0.63
Trim13Q9CYB0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.96■□□□□ 0.63
Trim13Q9CYB0 Gm16437-201ENSMUST00000025669 507 ntBASIC18.96■□□□□ 0.63
Trim13Q9CYB0 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim13Q9CYB0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Trim13Q9CYB0 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim13Q9CYB0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim13Q9CYB0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim13Q9CYB0 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim13Q9CYB0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim13Q9CYB0 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Trim13Q9CYB0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim13Q9CYB0 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim13Q9CYB0 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Trim13Q9CYB0 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim13Q9CYB0 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.95■□□□□ 0.62
Trim13Q9CYB0 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim13Q9CYB0 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.95■□□□□ 0.62
Trim13Q9CYB0 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Trim13Q9CYB0 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Trim13Q9CYB0 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim13Q9CYB0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim13Q9CYB0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim13Q9CYB0 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim13Q9CYB0 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Trim13Q9CYB0 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.93■□□□□ 0.62
Trim13Q9CYB0 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.93■□□□□ 0.62
Trim13Q9CYB0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Trim13Q9CYB0 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim13Q9CYB0 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Trim13Q9CYB0 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.93■□□□□ 0.62
Trim13Q9CYB0 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.93■□□□□ 0.62
Trim13Q9CYB0 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.93■□□□□ 0.62
Trim13Q9CYB0 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim13Q9CYB0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Trim13Q9CYB0 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim13Q9CYB0 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim13Q9CYB0 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.92■□□□□ 0.62
Trim13Q9CYB0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim13Q9CYB0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim13Q9CYB0 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim13Q9CYB0 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim13Q9CYB0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim13Q9CYB0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim13Q9CYB0 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim13Q9CYB0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim13Q9CYB0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim13Q9CYB0 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.91■□□□□ 0.62
Trim13Q9CYB0 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim13Q9CYB0 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim13Q9CYB0 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
Trim13Q9CYB0 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim13Q9CYB0 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Trim13Q9CYB0 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim13Q9CYB0 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim13Q9CYB0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim13Q9CYB0 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim13Q9CYB0 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim13Q9CYB0 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Trim13Q9CYB0 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Trim13Q9CYB0 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Trim13Q9CYB0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Trim13Q9CYB0 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim13Q9CYB0 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim13Q9CYB0 Gm11175-201ENSMUST00000116172 543 ntBASIC18.89■□□□□ 0.61
Trim13Q9CYB0 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.89■□□□□ 0.61
Trim13Q9CYB0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim13Q9CYB0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim13Q9CYB0 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim13Q9CYB0 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.89■□□□□ 0.61
Trim13Q9CYB0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim13Q9CYB0 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim13Q9CYB0 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim13Q9CYB0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim13Q9CYB0 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim13Q9CYB0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim13Q9CYB0 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Trim13Q9CYB0 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Trim13Q9CYB0 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim13Q9CYB0 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Trim13Q9CYB0 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim13Q9CYB0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim13Q9CYB0 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim13Q9CYB0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim13Q9CYB0 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim13Q9CYB0 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim13Q9CYB0 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim13Q9CYB0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms