Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Retreg3Q9CQV4 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retreg3Q9CQV4 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retreg3Q9CQV4 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Retreg3Q9CQV4 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retreg3Q9CQV4 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.81■□□□□ 0.92
Retreg3Q9CQV4 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.81■□□□□ 0.92
Retreg3Q9CQV4 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retreg3Q9CQV4 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Retreg3Q9CQV4 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retreg3Q9CQV4 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retreg3Q9CQV4 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retreg3Q9CQV4 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.81■□□□□ 0.92
Retreg3Q9CQV4 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Retreg3Q9CQV4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retreg3Q9CQV4 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retreg3Q9CQV4 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Retreg3Q9CQV4 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retreg3Q9CQV4 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Retreg3Q9CQV4 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.8■□□□□ 0.92
Retreg3Q9CQV4 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.8■□□□□ 0.92
Retreg3Q9CQV4 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retreg3Q9CQV4 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retreg3Q9CQV4 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retreg3Q9CQV4 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Retreg3Q9CQV4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Retreg3Q9CQV4 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.79■□□□□ 0.92
Retreg3Q9CQV4 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retreg3Q9CQV4 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Retreg3Q9CQV4 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.79■□□□□ 0.92
Retreg3Q9CQV4 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retreg3Q9CQV4 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retreg3Q9CQV4 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Retreg3Q9CQV4 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retreg3Q9CQV4 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retreg3Q9CQV4 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Retreg3Q9CQV4 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retreg3Q9CQV4 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.77■□□□□ 0.92
Retreg3Q9CQV4 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Retreg3Q9CQV4 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.77■□□□□ 0.92
Retreg3Q9CQV4 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.77■□□□□ 0.92
Retreg3Q9CQV4 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retreg3Q9CQV4 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retreg3Q9CQV4 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Retreg3Q9CQV4 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Retreg3Q9CQV4 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Retreg3Q9CQV4 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retreg3Q9CQV4 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Retreg3Q9CQV4 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.76■□□□□ 0.91
Retreg3Q9CQV4 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retreg3Q9CQV4 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retreg3Q9CQV4 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Retreg3Q9CQV4 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retreg3Q9CQV4 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Retreg3Q9CQV4 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retreg3Q9CQV4 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retreg3Q9CQV4 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retreg3Q9CQV4 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.75■□□□□ 0.91
Retreg3Q9CQV4 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.75■□□□□ 0.91
Retreg3Q9CQV4 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retreg3Q9CQV4 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.75■□□□□ 0.91
Retreg3Q9CQV4 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.75■□□□□ 0.91
Retreg3Q9CQV4 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retreg3Q9CQV4 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Retreg3Q9CQV4 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retreg3Q9CQV4 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retreg3Q9CQV4 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retreg3Q9CQV4 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.74■□□□□ 0.91
Retreg3Q9CQV4 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retreg3Q9CQV4 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retreg3Q9CQV4 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retreg3Q9CQV4 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
Retreg3Q9CQV4 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retreg3Q9CQV4 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retreg3Q9CQV4 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retreg3Q9CQV4 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Retreg3Q9CQV4 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retreg3Q9CQV4 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retreg3Q9CQV4 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.71■□□□□ 0.91
Retreg3Q9CQV4 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retreg3Q9CQV4 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retreg3Q9CQV4 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retreg3Q9CQV4 Gm7417-201ENSMUST00000192950 473 ntBASIC20.71■□□□□ 0.91
Retreg3Q9CQV4 Gm13241-201ENSMUST00000094493 780 ntBASIC20.71■□□□□ 0.91
Retreg3Q9CQV4 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retreg3Q9CQV4 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retreg3Q9CQV4 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retreg3Q9CQV4 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retreg3Q9CQV4 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retreg3Q9CQV4 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retreg3Q9CQV4 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Retreg3Q9CQV4 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Retreg3Q9CQV4 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retreg3Q9CQV4 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retreg3Q9CQV4 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retreg3Q9CQV4 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retreg3Q9CQV4 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retreg3Q9CQV4 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retreg3Q9CQV4 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Retreg3Q9CQV4 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms