Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trim16Q99PP9 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim16Q99PP9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim16Q99PP9 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Trim16Q99PP9 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim16Q99PP9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.06■□□□□ 0.8
Trim16Q99PP9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Trim16Q99PP9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim16Q99PP9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Trim16Q99PP9 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim16Q99PP9 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim16Q99PP9 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim16Q99PP9 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim16Q99PP9 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.05■□□□□ 0.8
Trim16Q99PP9 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.05■□□□□ 0.8
Trim16Q99PP9 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trim16Q99PP9 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.05■□□□□ 0.8
Trim16Q99PP9 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
Trim16Q99PP9 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim16Q99PP9 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Trim16Q99PP9 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim16Q99PP9 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim16Q99PP9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim16Q99PP9 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim16Q99PP9 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.04■□□□□ 0.8
Trim16Q99PP9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim16Q99PP9 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim16Q99PP9 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Trim16Q99PP9 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Trim16Q99PP9 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.04■□□□□ 0.8
Trim16Q99PP9 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Trim16Q99PP9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.04■□□□□ 0.8
Trim16Q99PP9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Trim16Q99PP9 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim16Q99PP9 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim16Q99PP9 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim16Q99PP9 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim16Q99PP9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim16Q99PP9 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim16Q99PP9 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim16Q99PP9 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Trim16Q99PP9 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trim16Q99PP9 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim16Q99PP9 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trim16Q99PP9 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trim16Q99PP9 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.02■□□□□ 0.79
Trim16Q99PP9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trim16Q99PP9 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim16Q99PP9 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim16Q99PP9 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim16Q99PP9 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Trim16Q99PP9 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.01■□□□□ 0.79
Trim16Q99PP9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trim16Q99PP9 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim16Q99PP9 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Trim16Q99PP9 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Trim16Q99PP9 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.01■□□□□ 0.79
Trim16Q99PP9 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.01■□□□□ 0.79
Trim16Q99PP9 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim16Q99PP9 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim16Q99PP9 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20■□□□□ 0.79
Trim16Q99PP9 Gm43006-201ENSMUST00000197702 1602 ntBASIC20■□□□□ 0.79
Trim16Q99PP9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Trim16Q99PP9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Trim16Q99PP9 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim16Q99PP9 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim16Q99PP9 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim16Q99PP9 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim16Q99PP9 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trim16Q99PP9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Trim16Q99PP9 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.99■□□□□ 0.79
Trim16Q99PP9 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trim16Q99PP9 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trim16Q99PP9 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim16Q99PP9 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim16Q99PP9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim16Q99PP9 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trim16Q99PP9 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim16Q99PP9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim16Q99PP9 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim16Q99PP9 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim16Q99PP9 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim16Q99PP9 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
Trim16Q99PP9 Gm10232-201ENSMUST00000089221 720 ntBASIC19.98■□□□□ 0.79
Trim16Q99PP9 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trim16Q99PP9 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim16Q99PP9 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.98■□□□□ 0.79
Trim16Q99PP9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
Trim16Q99PP9 Gm15546-201ENSMUST00000122095 826 ntBASIC19.97■□□□□ 0.79
Trim16Q99PP9 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim16Q99PP9 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.97■□□□□ 0.79
Trim16Q99PP9 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trim16Q99PP9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Trim16Q99PP9 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trim16Q99PP9 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim16Q99PP9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim16Q99PP9 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim16Q99PP9 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim16Q99PP9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Trim16Q99PP9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms