Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp1b1Q99LU0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp1b1Q99LU0 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.4■□□□□ 0.7
Chmp1b1Q99LU0 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Chmp1b1Q99LU0 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.4■□□□□ 0.7
Chmp1b1Q99LU0 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Chmp1b1Q99LU0 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp1b1Q99LU0 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp1b1Q99LU0 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp1b1Q99LU0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp1b1Q99LU0 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Chmp1b1Q99LU0 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.39■□□□□ 0.69
Chmp1b1Q99LU0 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.39■□□□□ 0.69
Chmp1b1Q99LU0 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp1b1Q99LU0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp1b1Q99LU0 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp1b1Q99LU0 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.39■□□□□ 0.69
Chmp1b1Q99LU0 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp1b1Q99LU0 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp1b1Q99LU0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp1b1Q99LU0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp1b1Q99LU0 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Chmp1b1Q99LU0 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.38■□□□□ 0.69
Chmp1b1Q99LU0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp1b1Q99LU0 Gm5812-201ENSMUST00000061073 957 ntBASIC19.38■□□□□ 0.69
Chmp1b1Q99LU0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Chmp1b1Q99LU0 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp1b1Q99LU0 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp1b1Q99LU0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Chmp1b1Q99LU0 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp1b1Q99LU0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Chmp1b1Q99LU0 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.37■□□□□ 0.69
Chmp1b1Q99LU0 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.37■□□□□ 0.69
Chmp1b1Q99LU0 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp1b1Q99LU0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
Chmp1b1Q99LU0 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Chmp1b1Q99LU0 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp1b1Q99LU0 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Chmp1b1Q99LU0 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp1b1Q99LU0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.36■□□□□ 0.69
Chmp1b1Q99LU0 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Chmp1b1Q99LU0 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp1b1Q99LU0 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp1b1Q99LU0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chmp1b1Q99LU0 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.35■□□□□ 0.69
Chmp1b1Q99LU0 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp1b1Q99LU0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp1b1Q99LU0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp1b1Q99LU0 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp1b1Q99LU0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Chmp1b1Q99LU0 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp1b1Q99LU0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Chmp1b1Q99LU0 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp1b1Q99LU0 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp1b1Q99LU0 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chmp1b1Q99LU0 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp1b1Q99LU0 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp1b1Q99LU0 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp1b1Q99LU0 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp1b1Q99LU0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp1b1Q99LU0 Gm15546-201ENSMUST00000122095 826 ntBASIC19.34■□□□□ 0.69
Chmp1b1Q99LU0 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Chmp1b1Q99LU0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Chmp1b1Q99LU0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.34■□□□□ 0.69
Chmp1b1Q99LU0 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp1b1Q99LU0 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Chmp1b1Q99LU0 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Chmp1b1Q99LU0 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp1b1Q99LU0 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chmp1b1Q99LU0 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Chmp1b1Q99LU0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Chmp1b1Q99LU0 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.33■□□□□ 0.69
Chmp1b1Q99LU0 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Chmp1b1Q99LU0 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Chmp1b1Q99LU0 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.33■□□□□ 0.68
Chmp1b1Q99LU0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.33■□□□□ 0.68
Chmp1b1Q99LU0 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chmp1b1Q99LU0 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Chmp1b1Q99LU0 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.33■□□□□ 0.68
Chmp1b1Q99LU0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp1b1Q99LU0 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp1b1Q99LU0 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp1b1Q99LU0 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp1b1Q99LU0 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp1b1Q99LU0 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Chmp1b1Q99LU0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp1b1Q99LU0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp1b1Q99LU0 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp1b1Q99LU0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp1b1Q99LU0 Gm15820-201ENSMUST00000201566 728 ntBASIC19.31■□□□□ 0.68
Chmp1b1Q99LU0 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp1b1Q99LU0 Gm10232-201ENSMUST00000089221 720 ntBASIC19.31■□□□□ 0.68
Chmp1b1Q99LU0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Chmp1b1Q99LU0 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp1b1Q99LU0 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp1b1Q99LU0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp1b1Q99LU0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp1b1Q99LU0 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Chmp1b1Q99LU0 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp1b1Q99LU0 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms