Protein–RNA interactions for Protein: Q91Y21

Pcdha1, Protocadherin alpha 1, mousemouse

Predictions only

Length 948 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1Q91Y21 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdha1Q91Y21 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdha1Q91Y21 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdha1Q91Y21 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdha1Q91Y21 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.6■■□□□ 1.05
Pcdha1Q91Y21 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.6■■□□□ 1.05
Pcdha1Q91Y21 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Pcdha1Q91Y21 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdha1Q91Y21 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdha1Q91Y21 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdha1Q91Y21 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdha1Q91Y21 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdha1Q91Y21 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdha1Q91Y21 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.59■■□□□ 1.05
Pcdha1Q91Y21 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.59■■□□□ 1.05
Pcdha1Q91Y21 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.59■■□□□ 1.05
Pcdha1Q91Y21 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdha1Q91Y21 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdha1Q91Y21 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdha1Q91Y21 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdha1Q91Y21 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.58■■□□□ 1.05
Pcdha1Q91Y21 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Pcdha1Q91Y21 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.58■■□□□ 1.05
Pcdha1Q91Y21 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.58■■□□□ 1.05
Pcdha1Q91Y21 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdha1Q91Y21 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdha1Q91Y21 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdha1Q91Y21 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.57■■□□□ 1.04
Pcdha1Q91Y21 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdha1Q91Y21 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Pcdha1Q91Y21 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.57■■□□□ 1.04
Pcdha1Q91Y21 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdha1Q91Y21 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
Pcdha1Q91Y21 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdha1Q91Y21 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Pcdha1Q91Y21 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdha1Q91Y21 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdha1Q91Y21 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdha1Q91Y21 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.56■■□□□ 1.04
Pcdha1Q91Y21 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdha1Q91Y21 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Pcdha1Q91Y21 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdha1Q91Y21 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdha1Q91Y21 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdha1Q91Y21 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Pcdha1Q91Y21 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdha1Q91Y21 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdha1Q91Y21 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdha1Q91Y21 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdha1Q91Y21 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdha1Q91Y21 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdha1Q91Y21 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdha1Q91Y21 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Pcdha1Q91Y21 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdha1Q91Y21 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Pcdha1Q91Y21 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.54■■□□□ 1.04
Pcdha1Q91Y21 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Pcdha1Q91Y21 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdha1Q91Y21 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdha1Q91Y21 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdha1Q91Y21 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdha1Q91Y21 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdha1Q91Y21 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdha1Q91Y21 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdha1Q91Y21 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdha1Q91Y21 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdha1Q91Y21 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdha1Q91Y21 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdha1Q91Y21 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdha1Q91Y21 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.52■■□□□ 1.04
Pcdha1Q91Y21 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.52■■□□□ 1.04
Pcdha1Q91Y21 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdha1Q91Y21 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.03
Pcdha1Q91Y21 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Pcdha1Q91Y21 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Pcdha1Q91Y21 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdha1Q91Y21 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdha1Q91Y21 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Pcdha1Q91Y21 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdha1Q91Y21 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.51■■□□□ 1.03
Pcdha1Q91Y21 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdha1Q91Y21 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Pcdha1Q91Y21 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdha1Q91Y21 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.51■■□□□ 1.03
Pcdha1Q91Y21 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdha1Q91Y21 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
Pcdha1Q91Y21 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdha1Q91Y21 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdha1Q91Y21 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdha1Q91Y21 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdha1Q91Y21 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.5■■□□□ 1.03
Pcdha1Q91Y21 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdha1Q91Y21 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdha1Q91Y21 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Pcdha1Q91Y21 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdha1Q91Y21 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdha1Q91Y21 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.49■■□□□ 1.03
Pcdha1Q91Y21 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
Pcdha1Q91Y21 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdha1Q91Y21 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms