Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.54■■□□□ 1.04
Pcdhb1Q91Y08 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb1Q91Y08 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb1Q91Y08 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb1Q91Y08 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb1Q91Y08 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.53■■□□□ 1.04
Pcdhb1Q91Y08 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.53■■□□□ 1.04
Pcdhb1Q91Y08 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Pcdhb1Q91Y08 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb1Q91Y08 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb1Q91Y08 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb1Q91Y08 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb1Q91Y08 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb1Q91Y08 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb1Q91Y08 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.03
Pcdhb1Q91Y08 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Pcdhb1Q91Y08 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.51■■□□□ 1.03
Pcdhb1Q91Y08 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhb1Q91Y08 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhb1Q91Y08 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.51■■□□□ 1.03
Pcdhb1Q91Y08 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhb1Q91Y08 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
Pcdhb1Q91Y08 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb1Q91Y08 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb1Q91Y08 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb1Q91Y08 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Pcdhb1Q91Y08 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb1Q91Y08 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb1Q91Y08 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Pcdhb1Q91Y08 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Pcdhb1Q91Y08 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.49■■□□□ 1.03
Pcdhb1Q91Y08 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Pcdhb1Q91Y08 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.49■■□□□ 1.03
Pcdhb1Q91Y08 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb1Q91Y08 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb1Q91Y08 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
Pcdhb1Q91Y08 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb1Q91Y08 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb1Q91Y08 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.48■■□□□ 1.03
Pcdhb1Q91Y08 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb1Q91Y08 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb1Q91Y08 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb1Q91Y08 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb1Q91Y08 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb1Q91Y08 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.47■■□□□ 1.03
Pcdhb1Q91Y08 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.47■■□□□ 1.03
Pcdhb1Q91Y08 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb1Q91Y08 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb1Q91Y08 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb1Q91Y08 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb1Q91Y08 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb1Q91Y08 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb1Q91Y08 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb1Q91Y08 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb1Q91Y08 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb1Q91Y08 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb1Q91Y08 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Pcdhb1Q91Y08 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb1Q91Y08 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Pcdhb1Q91Y08 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb1Q91Y08 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Pcdhb1Q91Y08 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.46■■□□□ 1.03
Pcdhb1Q91Y08 Gm5812-201ENSMUST00000061073 957 ntBASIC21.46■■□□□ 1.03
Pcdhb1Q91Y08 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb1Q91Y08 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb1Q91Y08 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb1Q91Y08 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
Pcdhb1Q91Y08 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb1Q91Y08 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.45■■□□□ 1.02
Pcdhb1Q91Y08 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb1Q91Y08 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Pcdhb1Q91Y08 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb1Q91Y08 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb1Q91Y08 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb1Q91Y08 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Pcdhb1Q91Y08 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb1Q91Y08 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb1Q91Y08 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb1Q91Y08 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb1Q91Y08 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb1Q91Y08 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb1Q91Y08 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb1Q91Y08 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb1Q91Y08 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb1Q91Y08 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Pcdhb1Q91Y08 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.43■■□□□ 1.02
Pcdhb1Q91Y08 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.43■■□□□ 1.02
Pcdhb1Q91Y08 Gm40881-201ENSMUST00000223397 166 ntBASIC21.43■■□□□ 1.02
Pcdhb1Q91Y08 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb1Q91Y08 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb1Q91Y08 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Pcdhb1Q91Y08 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb1Q91Y08 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb1Q91Y08 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.42■■□□□ 1.02
Pcdhb1Q91Y08 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb1Q91Y08 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb1Q91Y08 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.41■■□□□ 1.02
Pcdhb1Q91Y08 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb1Q91Y08 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb1Q91Y08 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.41■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms