Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.32■■□□□ 1
Pcdhb6Q91XZ4 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb6Q91XZ4 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb6Q91XZ4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb6Q91XZ4 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.31■■□□□ 1
Pcdhb6Q91XZ4 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb6Q91XZ4 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb6Q91XZ4 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb6Q91XZ4 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb6Q91XZ4 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.31■■□□□ 1
Pcdhb6Q91XZ4 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb6Q91XZ4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Pcdhb6Q91XZ4 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb6Q91XZ4 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb6Q91XZ4 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.3■■□□□ 1
Pcdhb6Q91XZ4 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb6Q91XZ4 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb6Q91XZ4 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Pcdhb6Q91XZ4 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.3■■□□□ 1
Pcdhb6Q91XZ4 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb6Q91XZ4 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.29■■□□□ 1
Pcdhb6Q91XZ4 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.29■■□□□ 1
Pcdhb6Q91XZ4 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.29■■□□□ 1
Pcdhb6Q91XZ4 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb6Q91XZ4 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.29■■□□□ 1
Pcdhb6Q91XZ4 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb6Q91XZ4 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Pcdhb6Q91XZ4 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb6Q91XZ4 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb6Q91XZ4 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.28■■□□□ 1
Pcdhb6Q91XZ4 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.28■■□□□ 1
Pcdhb6Q91XZ4 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.28■■□□□ 1
Pcdhb6Q91XZ4 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb6Q91XZ4 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb6Q91XZ4 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb6Q91XZ4 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb6Q91XZ4 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.28■■□□□ 1
Pcdhb6Q91XZ4 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb6Q91XZ4 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb6Q91XZ4 Gm40881-201ENSMUST00000223397 166 ntBASIC21.27■■□□□ 1
Pcdhb6Q91XZ4 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb6Q91XZ4 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Pcdhb6Q91XZ4 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Pcdhb6Q91XZ4 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb6Q91XZ4 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.26■□□□□ 0.99
Pcdhb6Q91XZ4 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.26■□□□□ 0.99
Pcdhb6Q91XZ4 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Pcdhb6Q91XZ4 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb6Q91XZ4 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb6Q91XZ4 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb6Q91XZ4 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb6Q91XZ4 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb6Q91XZ4 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb6Q91XZ4 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb6Q91XZ4 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb6Q91XZ4 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.25■□□□□ 0.99
Pcdhb6Q91XZ4 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.25■□□□□ 0.99
Pcdhb6Q91XZ4 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.25■□□□□ 0.99
Pcdhb6Q91XZ4 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Pcdhb6Q91XZ4 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb6Q91XZ4 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb6Q91XZ4 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb6Q91XZ4 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb6Q91XZ4 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb6Q91XZ4 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb6Q91XZ4 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb6Q91XZ4 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb6Q91XZ4 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb6Q91XZ4 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.23■□□□□ 0.99
Pcdhb6Q91XZ4 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.23■□□□□ 0.99
Pcdhb6Q91XZ4 Gm15820-201ENSMUST00000201566 728 ntBASIC21.23■□□□□ 0.99
Pcdhb6Q91XZ4 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb6Q91XZ4 Gm15546-201ENSMUST00000122095 826 ntBASIC21.22■□□□□ 0.99
Pcdhb6Q91XZ4 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb6Q91XZ4 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Pcdhb6Q91XZ4 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb6Q91XZ4 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb6Q91XZ4 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Pcdhb6Q91XZ4 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb6Q91XZ4 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.21■□□□□ 0.99
Pcdhb6Q91XZ4 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb6Q91XZ4 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Pcdhb6Q91XZ4 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb6Q91XZ4 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Pcdhb6Q91XZ4 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.2■□□□□ 0.98
Pcdhb6Q91XZ4 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb6Q91XZ4 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb6Q91XZ4 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.2■□□□□ 0.98
Pcdhb6Q91XZ4 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.2■□□□□ 0.98
Pcdhb6Q91XZ4 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.2■□□□□ 0.98
Pcdhb6Q91XZ4 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb6Q91XZ4 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb6Q91XZ4 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
Pcdhb6Q91XZ4 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb6Q91XZ4 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.19■□□□□ 0.98
Pcdhb6Q91XZ4 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb6Q91XZ4 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb6Q91XZ4 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb6Q91XZ4 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb6Q91XZ4 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms