Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Pcdhga3Q91XY5 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Pcdhga3Q91XY5 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga3Q91XY5 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.29■□□□□ 0.52
Pcdhga3Q91XY5 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga3Q91XY5 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga3Q91XY5 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga3Q91XY5 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga3Q91XY5 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga3Q91XY5 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga3Q91XY5 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga3Q91XY5 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga3Q91XY5 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.28■□□□□ 0.52
Pcdhga3Q91XY5 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga3Q91XY5 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga3Q91XY5 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.28■□□□□ 0.52
Pcdhga3Q91XY5 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga3Q91XY5 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga3Q91XY5 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.28■□□□□ 0.52
Pcdhga3Q91XY5 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga3Q91XY5 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga3Q91XY5 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga3Q91XY5 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhga3Q91XY5 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhga3Q91XY5 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhga3Q91XY5 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhga3Q91XY5 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhga3Q91XY5 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.27■□□□□ 0.52
Pcdhga3Q91XY5 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhga3Q91XY5 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Pcdhga3Q91XY5 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.27■□□□□ 0.52
Pcdhga3Q91XY5 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Pcdhga3Q91XY5 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhga3Q91XY5 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.27■□□□□ 0.51
Pcdhga3Q91XY5 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhga3Q91XY5 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Pcdhga3Q91XY5 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhga3Q91XY5 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhga3Q91XY5 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhga3Q91XY5 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga3Q91XY5 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga3Q91XY5 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhga3Q91XY5 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga3Q91XY5 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga3Q91XY5 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhga3Q91XY5 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga3Q91XY5 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhga3Q91XY5 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Pcdhga3Q91XY5 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga3Q91XY5 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga3Q91XY5 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga3Q91XY5 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga3Q91XY5 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Pcdhga3Q91XY5 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhga3Q91XY5 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga3Q91XY5 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga3Q91XY5 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga3Q91XY5 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga3Q91XY5 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga3Q91XY5 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga3Q91XY5 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.25■□□□□ 0.51
Pcdhga3Q91XY5 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga3Q91XY5 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Pcdhga3Q91XY5 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Pcdhga3Q91XY5 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga3Q91XY5 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
Pcdhga3Q91XY5 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga3Q91XY5 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga3Q91XY5 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga3Q91XY5 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga3Q91XY5 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga3Q91XY5 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga3Q91XY5 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga3Q91XY5 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga3Q91XY5 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga3Q91XY5 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga3Q91XY5 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.23■□□□□ 0.51
Pcdhga3Q91XY5 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga3Q91XY5 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Pcdhga3Q91XY5 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga3Q91XY5 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Pcdhga3Q91XY5 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga3Q91XY5 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Pcdhga3Q91XY5 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Pcdhga3Q91XY5 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.22■□□□□ 0.51
Pcdhga3Q91XY5 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Pcdhga3Q91XY5 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga3Q91XY5 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga3Q91XY5 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Pcdhga3Q91XY5 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Pcdhga3Q91XY5 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Pcdhga3Q91XY5 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga3Q91XY5 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Pcdhga3Q91XY5 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga3Q91XY5 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Pcdhga3Q91XY5 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga3Q91XY5 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga3Q91XY5 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga3Q91XY5 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Pcdhga3Q91XY5 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms