Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vsx1Q91V10 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vsx1Q91V10 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Vsx1Q91V10 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vsx1Q91V10 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Vsx1Q91V10 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vsx1Q91V10 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vsx1Q91V10 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vsx1Q91V10 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Vsx1Q91V10 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Vsx1Q91V10 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vsx1Q91V10 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.51■□□□□ 0.87
Vsx1Q91V10 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vsx1Q91V10 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vsx1Q91V10 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vsx1Q91V10 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vsx1Q91V10 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vsx1Q91V10 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Vsx1Q91V10 Gm27011-201ENSMUST00000182352 972 ntBASIC20.5■□□□□ 0.87
Vsx1Q91V10 Gm43173-201ENSMUST00000202246 593 ntBASIC20.5■□□□□ 0.87
Vsx1Q91V10 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.5■□□□□ 0.87
Vsx1Q91V10 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Vsx1Q91V10 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vsx1Q91V10 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vsx1Q91V10 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Vsx1Q91V10 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vsx1Q91V10 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vsx1Q91V10 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vsx1Q91V10 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Vsx1Q91V10 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.49■□□□□ 0.87
Vsx1Q91V10 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vsx1Q91V10 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vsx1Q91V10 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vsx1Q91V10 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Vsx1Q91V10 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vsx1Q91V10 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vsx1Q91V10 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.48■□□□□ 0.87
Vsx1Q91V10 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.48■□□□□ 0.87
Vsx1Q91V10 Gm27405-201ENSMUST00000184201 112 ntBASIC20.48■□□□□ 0.87
Vsx1Q91V10 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.48■□□□□ 0.87
Vsx1Q91V10 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.48■□□□□ 0.87
Vsx1Q91V10 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Vsx1Q91V10 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Vsx1Q91V10 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vsx1Q91V10 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vsx1Q91V10 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.47■□□□□ 0.87
Vsx1Q91V10 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.47■□□□□ 0.87
Vsx1Q91V10 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Vsx1Q91V10 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vsx1Q91V10 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vsx1Q91V10 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.47■□□□□ 0.87
Vsx1Q91V10 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.47■□□□□ 0.87
Vsx1Q91V10 Gm42569-201ENSMUST00000200539 472 ntBASIC20.47■□□□□ 0.87
Vsx1Q91V10 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Vsx1Q91V10 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Vsx1Q91V10 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Vsx1Q91V10 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vsx1Q91V10 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Vsx1Q91V10 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vsx1Q91V10 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Vsx1Q91V10 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.46■□□□□ 0.87
Vsx1Q91V10 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Vsx1Q91V10 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Vsx1Q91V10 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Vsx1Q91V10 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vsx1Q91V10 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vsx1Q91V10 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vsx1Q91V10 Gm12251-201ENSMUST00000117893 792 ntBASIC20.45■□□□□ 0.86
Vsx1Q91V10 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Vsx1Q91V10 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Vsx1Q91V10 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.45■□□□□ 0.86
Vsx1Q91V10 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Vsx1Q91V10 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Vsx1Q91V10 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vsx1Q91V10 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vsx1Q91V10 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Vsx1Q91V10 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Vsx1Q91V10 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Vsx1Q91V10 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vsx1Q91V10 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
Vsx1Q91V10 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Vsx1Q91V10 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vsx1Q91V10 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vsx1Q91V10 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Vsx1Q91V10 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vsx1Q91V10 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vsx1Q91V10 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Vsx1Q91V10 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Vsx1Q91V10 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vsx1Q91V10 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.42■□□□□ 0.86
Vsx1Q91V10 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.42■□□□□ 0.86
Vsx1Q91V10 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Vsx1Q91V10 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vsx1Q91V10 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vsx1Q91V10 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vsx1Q91V10 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.42■□□□□ 0.86
Vsx1Q91V10 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Vsx1Q91V10 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.42■□□□□ 0.86
Vsx1Q91V10 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Vsx1Q91V10 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms