Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tram1Q91V04 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tram1Q91V04 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tram1Q91V04 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tram1Q91V04 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tram1Q91V04 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tram1Q91V04 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tram1Q91V04 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tram1Q91V04 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tram1Q91V04 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tram1Q91V04 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.72■□□□□ 0.43
Tram1Q91V04 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tram1Q91V04 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tram1Q91V04 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Tram1Q91V04 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tram1Q91V04 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tram1Q91V04 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tram1Q91V04 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tram1Q91V04 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
Tram1Q91V04 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tram1Q91V04 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tram1Q91V04 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tram1Q91V04 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tram1Q91V04 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tram1Q91V04 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tram1Q91V04 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tram1Q91V04 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tram1Q91V04 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Tram1Q91V04 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tram1Q91V04 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.7■□□□□ 0.42
Tram1Q91V04 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tram1Q91V04 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tram1Q91V04 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tram1Q91V04 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tram1Q91V04 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tram1Q91V04 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tram1Q91V04 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tram1Q91V04 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tram1Q91V04 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tram1Q91V04 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Tram1Q91V04 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tram1Q91V04 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tram1Q91V04 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tram1Q91V04 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tram1Q91V04 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tram1Q91V04 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tram1Q91V04 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tram1Q91V04 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tram1Q91V04 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tram1Q91V04 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tram1Q91V04 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Tram1Q91V04 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tram1Q91V04 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.68■□□□□ 0.42
Tram1Q91V04 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.68■□□□□ 0.42
Tram1Q91V04 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tram1Q91V04 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tram1Q91V04 Iqck-206ENSMUST00000208658 2891 ntBASIC17.68■□□□□ 0.42
Tram1Q91V04 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Tram1Q91V04 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Tram1Q91V04 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tram1Q91V04 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Tram1Q91V04 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tram1Q91V04 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tram1Q91V04 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.67■□□□□ 0.42
Tram1Q91V04 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tram1Q91V04 Gm7432-201ENSMUST00000210343 879 ntBASIC17.67■□□□□ 0.42
Tram1Q91V04 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.67■□□□□ 0.42
Tram1Q91V04 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Tram1Q91V04 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tram1Q91V04 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tram1Q91V04 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tram1Q91V04 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tram1Q91V04 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tram1Q91V04 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tram1Q91V04 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tram1Q91V04 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tram1Q91V04 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.66■□□□□ 0.42
Tram1Q91V04 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tram1Q91V04 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.66■□□□□ 0.42
Tram1Q91V04 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tram1Q91V04 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tram1Q91V04 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tram1Q91V04 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tram1Q91V04 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tram1Q91V04 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tram1Q91V04 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tram1Q91V04 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tram1Q91V04 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tram1Q91V04 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Tram1Q91V04 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.65■□□□□ 0.42
Tram1Q91V04 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tram1Q91V04 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tram1Q91V04 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tram1Q91V04 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.65■□□□□ 0.42
Tram1Q91V04 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Tram1Q91V04 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.65■□□□□ 0.42
Tram1Q91V04 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Tram1Q91V04 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Tram1Q91V04 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tram1Q91V04 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms