Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retreg1dQ8VE91 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retreg1dQ8VE91 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retreg1dQ8VE91 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retreg1dQ8VE91 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retreg1dQ8VE91 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.36■□□□□ 0.85
Retreg1dQ8VE91 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retreg1dQ8VE91 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Retreg1dQ8VE91 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retreg1dQ8VE91 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retreg1dQ8VE91 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retreg1dQ8VE91 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Retreg1dQ8VE91 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retreg1dQ8VE91 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.35■□□□□ 0.85
Retreg1dQ8VE91 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.35■□□□□ 0.85
Retreg1dQ8VE91 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retreg1dQ8VE91 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retreg1dQ8VE91 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retreg1dQ8VE91 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.34■□□□□ 0.85
Retreg1dQ8VE91 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Retreg1dQ8VE91 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retreg1dQ8VE91 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retreg1dQ8VE91 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Retreg1dQ8VE91 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retreg1dQ8VE91 Gm9847-201ENSMUST00000052528 599 ntBASIC20.34■□□□□ 0.85
Retreg1dQ8VE91 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retreg1dQ8VE91 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.34■□□□□ 0.85
Retreg1dQ8VE91 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retreg1dQ8VE91 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retreg1dQ8VE91 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.33■□□□□ 0.85
Retreg1dQ8VE91 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retreg1dQ8VE91 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retreg1dQ8VE91 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.33■□□□□ 0.85
Retreg1dQ8VE91 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.33■□□□□ 0.85
Retreg1dQ8VE91 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retreg1dQ8VE91 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retreg1dQ8VE91 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Retreg1dQ8VE91 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Retreg1dQ8VE91 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Retreg1dQ8VE91 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Retreg1dQ8VE91 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retreg1dQ8VE91 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Retreg1dQ8VE91 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retreg1dQ8VE91 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retreg1dQ8VE91 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retreg1dQ8VE91 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.32■□□□□ 0.84
Retreg1dQ8VE91 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retreg1dQ8VE91 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retreg1dQ8VE91 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.32■□□□□ 0.84
Retreg1dQ8VE91 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retreg1dQ8VE91 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retreg1dQ8VE91 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retreg1dQ8VE91 Gm13241-201ENSMUST00000094493 780 ntBASIC20.32■□□□□ 0.84
Retreg1dQ8VE91 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retreg1dQ8VE91 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retreg1dQ8VE91 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Retreg1dQ8VE91 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Retreg1dQ8VE91 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Retreg1dQ8VE91 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retreg1dQ8VE91 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retreg1dQ8VE91 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retreg1dQ8VE91 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Retreg1dQ8VE91 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retreg1dQ8VE91 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.3■□□□□ 0.84
Retreg1dQ8VE91 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retreg1dQ8VE91 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Retreg1dQ8VE91 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retreg1dQ8VE91 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retreg1dQ8VE91 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Retreg1dQ8VE91 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Retreg1dQ8VE91 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retreg1dQ8VE91 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retreg1dQ8VE91 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Retreg1dQ8VE91 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retreg1dQ8VE91 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retreg1dQ8VE91 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Retreg1dQ8VE91 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.28■□□□□ 0.84
Retreg1dQ8VE91 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Retreg1dQ8VE91 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retreg1dQ8VE91 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retreg1dQ8VE91 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.28■□□□□ 0.84
Retreg1dQ8VE91 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retreg1dQ8VE91 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retreg1dQ8VE91 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.28■□□□□ 0.84
Retreg1dQ8VE91 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retreg1dQ8VE91 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Retreg1dQ8VE91 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.27■□□□□ 0.84
Retreg1dQ8VE91 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
Retreg1dQ8VE91 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retreg1dQ8VE91 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retreg1dQ8VE91 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retreg1dQ8VE91 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retreg1dQ8VE91 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retreg1dQ8VE91 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Retreg1dQ8VE91 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Retreg1dQ8VE91 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retreg1dQ8VE91 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retreg1dQ8VE91 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.26■□□□□ 0.83
Retreg1dQ8VE91 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retreg1dQ8VE91 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms