Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.48■□□□□ 0.71
Ndc1Q8VCB1 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ndc1Q8VCB1 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ndc1Q8VCB1 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Ndc1Q8VCB1 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ndc1Q8VCB1 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Ndc1Q8VCB1 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.47■□□□□ 0.71
Ndc1Q8VCB1 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Ndc1Q8VCB1 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ndc1Q8VCB1 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ndc1Q8VCB1 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.47■□□□□ 0.71
Ndc1Q8VCB1 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ndc1Q8VCB1 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ndc1Q8VCB1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ndc1Q8VCB1 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Ndc1Q8VCB1 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ndc1Q8VCB1 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.46■□□□□ 0.71
Ndc1Q8VCB1 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.46■□□□□ 0.71
Ndc1Q8VCB1 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ndc1Q8VCB1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ndc1Q8VCB1 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ndc1Q8VCB1 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.46■□□□□ 0.71
Ndc1Q8VCB1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ndc1Q8VCB1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.45■□□□□ 0.7
Ndc1Q8VCB1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ndc1Q8VCB1 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.45■□□□□ 0.7
Ndc1Q8VCB1 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ndc1Q8VCB1 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.45■□□□□ 0.7
Ndc1Q8VCB1 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Ndc1Q8VCB1 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ndc1Q8VCB1 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ndc1Q8VCB1 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ndc1Q8VCB1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Ndc1Q8VCB1 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.44■□□□□ 0.7
Ndc1Q8VCB1 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ndc1Q8VCB1 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ndc1Q8VCB1 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ndc1Q8VCB1 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.44■□□□□ 0.7
Ndc1Q8VCB1 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.44■□□□□ 0.7
Ndc1Q8VCB1 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ndc1Q8VCB1 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ndc1Q8VCB1 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ndc1Q8VCB1 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ndc1Q8VCB1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ndc1Q8VCB1 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ndc1Q8VCB1 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.43■□□□□ 0.7
Ndc1Q8VCB1 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ndc1Q8VCB1 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.43■□□□□ 0.7
Ndc1Q8VCB1 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.43■□□□□ 0.7
Ndc1Q8VCB1 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ndc1Q8VCB1 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Ndc1Q8VCB1 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ndc1Q8VCB1 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ndc1Q8VCB1 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ndc1Q8VCB1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ndc1Q8VCB1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ndc1Q8VCB1 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ndc1Q8VCB1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Ndc1Q8VCB1 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ndc1Q8VCB1 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ndc1Q8VCB1 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ndc1Q8VCB1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ndc1Q8VCB1 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Ndc1Q8VCB1 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ndc1Q8VCB1 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Ndc1Q8VCB1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ndc1Q8VCB1 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Ndc1Q8VCB1 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ndc1Q8VCB1 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ndc1Q8VCB1 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ndc1Q8VCB1 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.41■□□□□ 0.7
Ndc1Q8VCB1 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.41■□□□□ 0.7
Ndc1Q8VCB1 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.41■□□□□ 0.7
Ndc1Q8VCB1 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Ndc1Q8VCB1 Golgb1-201ENSMUST00000023534 498 ntBASIC19.41■□□□□ 0.7
Ndc1Q8VCB1 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ndc1Q8VCB1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ndc1Q8VCB1 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ndc1Q8VCB1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ndc1Q8VCB1 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ndc1Q8VCB1 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.4■□□□□ 0.7
Ndc1Q8VCB1 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.4■□□□□ 0.7
Ndc1Q8VCB1 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ndc1Q8VCB1 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.4■□□□□ 0.7
Ndc1Q8VCB1 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ndc1Q8VCB1 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Ndc1Q8VCB1 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.39■□□□□ 0.69
Ndc1Q8VCB1 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ndc1Q8VCB1 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Ndc1Q8VCB1 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ndc1Q8VCB1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ndc1Q8VCB1 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ndc1Q8VCB1 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ndc1Q8VCB1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ndc1Q8VCB1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ndc1Q8VCB1 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ndc1Q8VCB1 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ndc1Q8VCB1 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ndc1Q8VCB1 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ndc1Q8VCB1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms