Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lsm1Q8VC85 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Lsm1Q8VC85 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Lsm1Q8VC85 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Lsm1Q8VC85 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.81■□□□□ 0.76
Lsm1Q8VC85 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm1Q8VC85 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm1Q8VC85 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Lsm1Q8VC85 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm1Q8VC85 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Lsm1Q8VC85 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Lsm1Q8VC85 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Lsm1Q8VC85 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
Lsm1Q8VC85 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Lsm1Q8VC85 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lsm1Q8VC85 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Lsm1Q8VC85 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.8■□□□□ 0.76
Lsm1Q8VC85 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Lsm1Q8VC85 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Lsm1Q8VC85 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lsm1Q8VC85 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Lsm1Q8VC85 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lsm1Q8VC85 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Lsm1Q8VC85 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.8■□□□□ 0.76
Lsm1Q8VC85 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Lsm1Q8VC85 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.79■□□□□ 0.76
Lsm1Q8VC85 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lsm1Q8VC85 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lsm1Q8VC85 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.79■□□□□ 0.76
Lsm1Q8VC85 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.79■□□□□ 0.76
Lsm1Q8VC85 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lsm1Q8VC85 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lsm1Q8VC85 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lsm1Q8VC85 Cap2-205ENSMUST00000225824 1634 ntBASIC19.79■□□□□ 0.76
Lsm1Q8VC85 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Lsm1Q8VC85 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lsm1Q8VC85 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lsm1Q8VC85 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lsm1Q8VC85 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lsm1Q8VC85 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Lsm1Q8VC85 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
Lsm1Q8VC85 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lsm1Q8VC85 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lsm1Q8VC85 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lsm1Q8VC85 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lsm1Q8VC85 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lsm1Q8VC85 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Lsm1Q8VC85 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Lsm1Q8VC85 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lsm1Q8VC85 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Lsm1Q8VC85 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lsm1Q8VC85 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lsm1Q8VC85 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.77■□□□□ 0.76
Lsm1Q8VC85 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Lsm1Q8VC85 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Lsm1Q8VC85 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.77■□□□□ 0.76
Lsm1Q8VC85 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Lsm1Q8VC85 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lsm1Q8VC85 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.76■□□□□ 0.75
Lsm1Q8VC85 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lsm1Q8VC85 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lsm1Q8VC85 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lsm1Q8VC85 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lsm1Q8VC85 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.76■□□□□ 0.75
Lsm1Q8VC85 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lsm1Q8VC85 Gm45444-201ENSMUST00000211394 898 ntBASIC19.76■□□□□ 0.75
Lsm1Q8VC85 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lsm1Q8VC85 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lsm1Q8VC85 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lsm1Q8VC85 Notumos-201ENSMUST00000151998 2659 ntBASIC19.76■□□□□ 0.75
Lsm1Q8VC85 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lsm1Q8VC85 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lsm1Q8VC85 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm1Q8VC85 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm1Q8VC85 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm1Q8VC85 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm1Q8VC85 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm1Q8VC85 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.75■□□□□ 0.75
Lsm1Q8VC85 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.75■□□□□ 0.75
Lsm1Q8VC85 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm1Q8VC85 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.75■□□□□ 0.75
Lsm1Q8VC85 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.75■□□□□ 0.75
Lsm1Q8VC85 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm1Q8VC85 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm1Q8VC85 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm1Q8VC85 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm1Q8VC85 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Lsm1Q8VC85 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Lsm1Q8VC85 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm1Q8VC85 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm1Q8VC85 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Lsm1Q8VC85 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Lsm1Q8VC85 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Lsm1Q8VC85 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lsm1Q8VC85 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Lsm1Q8VC85 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.74■□□□□ 0.75
Lsm1Q8VC85 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Lsm1Q8VC85 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Lsm1Q8VC85 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Lsm1Q8VC85 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms