Protein–RNA interactions for Protein: Q8R4P5

Tmc1, Transmembrane channel-like protein 1, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc1Q8R4P5 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Tmc1Q8R4P5 Gm5812-201ENSMUST00000061073 957 ntBASIC25.32■■□□□ 1.64
Tmc1Q8R4P5 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Tmc1Q8R4P5 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
Tmc1Q8R4P5 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC25.31■■□□□ 1.64
Tmc1Q8R4P5 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Tmc1Q8R4P5 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Tmc1Q8R4P5 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
Tmc1Q8R4P5 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Tmc1Q8R4P5 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Tmc1Q8R4P5 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Tmc1Q8R4P5 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Tmc1Q8R4P5 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Tmc1Q8R4P5 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Tmc1Q8R4P5 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Tmc1Q8R4P5 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Tmc1Q8R4P5 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC25.3■■□□□ 1.64
Tmc1Q8R4P5 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Tmc1Q8R4P5 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
Tmc1Q8R4P5 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Tmc1Q8R4P5 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Tmc1Q8R4P5 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Tmc1Q8R4P5 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
Tmc1Q8R4P5 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC25.29■■□□□ 1.64
Tmc1Q8R4P5 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Tmc1Q8R4P5 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
Tmc1Q8R4P5 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Tmc1Q8R4P5 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Tmc1Q8R4P5 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Tmc1Q8R4P5 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Tmc1Q8R4P5 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Tmc1Q8R4P5 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
Tmc1Q8R4P5 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Tmc1Q8R4P5 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Tmc1Q8R4P5 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Tmc1Q8R4P5 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Tmc1Q8R4P5 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Tmc1Q8R4P5 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Tmc1Q8R4P5 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Tmc1Q8R4P5 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
Tmc1Q8R4P5 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
Tmc1Q8R4P5 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
Tmc1Q8R4P5 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
Tmc1Q8R4P5 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Tmc1Q8R4P5 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Tmc1Q8R4P5 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Tmc1Q8R4P5 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Tmc1Q8R4P5 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Tmc1Q8R4P5 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Tmc1Q8R4P5 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Tmc1Q8R4P5 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Tmc1Q8R4P5 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
Tmc1Q8R4P5 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Tmc1Q8R4P5 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC25.24■■□□□ 1.63
Tmc1Q8R4P5 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC25.24■■□□□ 1.63
Tmc1Q8R4P5 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Tmc1Q8R4P5 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Tmc1Q8R4P5 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Tmc1Q8R4P5 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC25.23■■□□□ 1.63
Tmc1Q8R4P5 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Tmc1Q8R4P5 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Tmc1Q8R4P5 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
Tmc1Q8R4P5 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Tmc1Q8R4P5 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
Tmc1Q8R4P5 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Tmc1Q8R4P5 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
Tmc1Q8R4P5 Golph3-202ENSMUST00000226517 2359 ntBASIC25.23■■□□□ 1.63
Tmc1Q8R4P5 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
Tmc1Q8R4P5 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Tmc1Q8R4P5 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
Tmc1Q8R4P5 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Tmc1Q8R4P5 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Tmc1Q8R4P5 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Tmc1Q8R4P5 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Tmc1Q8R4P5 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Tmc1Q8R4P5 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Tmc1Q8R4P5 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Tmc1Q8R4P5 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Tmc1Q8R4P5 AC158990.1-201ENSMUST00000221450 2016 ntBASIC25.21■■□□□ 1.63
Tmc1Q8R4P5 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Tmc1Q8R4P5 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Tmc1Q8R4P5 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Tmc1Q8R4P5 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Tmc1Q8R4P5 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC25.21■■□□□ 1.63
Tmc1Q8R4P5 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.63
Tmc1Q8R4P5 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
Tmc1Q8R4P5 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Tmc1Q8R4P5 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Tmc1Q8R4P5 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Tmc1Q8R4P5 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
Tmc1Q8R4P5 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Tmc1Q8R4P5 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
Tmc1Q8R4P5 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Tmc1Q8R4P5 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Tmc1Q8R4P5 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Tmc1Q8R4P5 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
Tmc1Q8R4P5 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
Tmc1Q8R4P5 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Tmc1Q8R4P5 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Tmc1Q8R4P5 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms