Protein–RNA interactions for Protein: Q8R4I4

Gtf2a1l, TFIIA-alpha and beta-like factor, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1lQ8R4I4 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.15■□□□□ 0.82
Gtf2a1lQ8R4I4 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gtf2a1lQ8R4I4 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Gtf2a1lQ8R4I4 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Gtf2a1lQ8R4I4 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Gtf2a1lQ8R4I4 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gtf2a1lQ8R4I4 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Gtf2a1lQ8R4I4 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Gtf2a1lQ8R4I4 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gtf2a1lQ8R4I4 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.14■□□□□ 0.81
Gtf2a1lQ8R4I4 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gtf2a1lQ8R4I4 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.14■□□□□ 0.81
Gtf2a1lQ8R4I4 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gtf2a1lQ8R4I4 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Gtf2a1lQ8R4I4 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gtf2a1lQ8R4I4 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gtf2a1lQ8R4I4 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Gtf2a1lQ8R4I4 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Gtf2a1lQ8R4I4 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gtf2a1lQ8R4I4 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gtf2a1lQ8R4I4 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gtf2a1lQ8R4I4 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gtf2a1lQ8R4I4 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gtf2a1lQ8R4I4 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gtf2a1lQ8R4I4 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.12■□□□□ 0.81
Gtf2a1lQ8R4I4 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gtf2a1lQ8R4I4 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.12■□□□□ 0.81
Gtf2a1lQ8R4I4 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gtf2a1lQ8R4I4 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Gtf2a1lQ8R4I4 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.11■□□□□ 0.81
Gtf2a1lQ8R4I4 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gtf2a1lQ8R4I4 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gtf2a1lQ8R4I4 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gtf2a1lQ8R4I4 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Gtf2a1lQ8R4I4 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Gtf2a1lQ8R4I4 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.1■□□□□ 0.81
Gtf2a1lQ8R4I4 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gtf2a1lQ8R4I4 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.1■□□□□ 0.81
Gtf2a1lQ8R4I4 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.1■□□□□ 0.81
Gtf2a1lQ8R4I4 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.09■□□□□ 0.81
Gtf2a1lQ8R4I4 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gtf2a1lQ8R4I4 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Gtf2a1lQ8R4I4 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.09■□□□□ 0.81
Gtf2a1lQ8R4I4 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gtf2a1lQ8R4I4 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Gtf2a1lQ8R4I4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gtf2a1lQ8R4I4 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Gtf2a1lQ8R4I4 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Gtf2a1lQ8R4I4 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gtf2a1lQ8R4I4 Etf1-202ENSMUST00000180351 108 ntBASIC20.08■□□□□ 0.81
Gtf2a1lQ8R4I4 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gtf2a1lQ8R4I4 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Gtf2a1lQ8R4I4 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gtf2a1lQ8R4I4 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gtf2a1lQ8R4I4 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gtf2a1lQ8R4I4 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gtf2a1lQ8R4I4 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Gtf2a1lQ8R4I4 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gtf2a1lQ8R4I4 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gtf2a1lQ8R4I4 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.07■□□□□ 0.8
Gtf2a1lQ8R4I4 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.07■□□□□ 0.8
Gtf2a1lQ8R4I4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gtf2a1lQ8R4I4 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gtf2a1lQ8R4I4 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gtf2a1lQ8R4I4 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.07■□□□□ 0.8
Gtf2a1lQ8R4I4 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Gtf2a1lQ8R4I4 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf2a1lQ8R4I4 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf2a1lQ8R4I4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Gtf2a1lQ8R4I4 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.06■□□□□ 0.8
Gtf2a1lQ8R4I4 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
Gtf2a1lQ8R4I4 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf2a1lQ8R4I4 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf2a1lQ8R4I4 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf2a1lQ8R4I4 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
Gtf2a1lQ8R4I4 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Gtf2a1lQ8R4I4 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf2a1lQ8R4I4 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.06■□□□□ 0.8
Gtf2a1lQ8R4I4 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gtf2a1lQ8R4I4 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gtf2a1lQ8R4I4 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gtf2a1lQ8R4I4 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Gtf2a1lQ8R4I4 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
Gtf2a1lQ8R4I4 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gtf2a1lQ8R4I4 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gtf2a1lQ8R4I4 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gtf2a1lQ8R4I4 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Gtf2a1lQ8R4I4 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf2a1lQ8R4I4 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf2a1lQ8R4I4 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf2a1lQ8R4I4 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf2a1lQ8R4I4 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf2a1lQ8R4I4 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf2a1lQ8R4I4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf2a1lQ8R4I4 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf2a1lQ8R4I4 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf2a1lQ8R4I4 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.03■□□□□ 0.8
Gtf2a1lQ8R4I4 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.03■□□□□ 0.8
Gtf2a1lQ8R4I4 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf2a1lQ8R4I4 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 124.1 ms